RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 GPR15P49685 360 aa17.46■□□□□ 0.39
VHL-202ENST00000345392 MAPKAPK3Q16644 382 aa17.46■□□□□ 0.39
VHL-202ENST00000345392 MS4A13Q5J8X5 152 aa17.46■□□□□ 0.39
VHL-202ENST00000345392 TEX26Q8N6G2 289 aa17.46■□□□□ 0.39
VHL-202ENST00000345392 ZNF540Q8NDQ6 660 aa17.46■□□□□ 0.39
VHL-202ENST00000345392 PHF10Q8WUB8 498 aaKnown RBP17.46■□□□□ 0.39
VHL-202ENST00000345392 ACBD6Q9BR61 282 aa17.46■□□□□ 0.39
VHL-202ENST00000345392 IQCF5A8MTL0 148 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 NDST3O95803 873 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 FGF1P05230 155 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 ITGB6P18564 788 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 PPP5CP53041 499 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 SLC35A2P78381 396 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 KIAA0040Q15053 153 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 PLD3Q8IV08 490 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 AADATQ8N5Z0 425 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 OR4F6Q8NGB9 312 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 CAPSLQ8WWF8 208 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 UBE2FQ969M7 185 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 ZNF382Q96SR6 550 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 TRIM62Q9BVG3 475 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 ZFP14Q9HCL3 533 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 PRDM5Q9NQX1 630 aaPredicted RBP17.45■□□□□ 0.38
VHL-202ENST00000345392 A0A0U1RQS6 177 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 GRXCR2A6NFK2 248 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 TBX1O43435 398 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 CREG1O75629 220 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 RHOQP17081 205 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 IGFBP5P24593 272 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 SPANXN4Q5MJ08 99 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 LRRC8DQ7L1W4 858 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 NANOGNBQ7Z5D8 188 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 PIANPQ8IYJ0 282 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 NKAPQ8N5F7 415 aaKnown RBP17.45■□□□□ 0.38
VHL-202ENST00000345392 KRTCAP2Q8N6L1 136 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 GTF3C2Q8WUA4 911 aaPredicted RBP17.45■□□□□ 0.38
VHL-202ENST00000345392 POLR1EQ9GZS1 481 aaKnown RBP17.45■□□□□ 0.38
VHL-202ENST00000345392 PKP3Q9Y446 797 aa17.45■□□□□ 0.38
VHL-202ENST00000345392 A6NL46 340 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 DLGAP3O95886 979 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 TBX18O95935 607 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 LCKP06239 509 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 HLA-DPA1P20036 260 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ST13P50502 369 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 GBX1Q14549 363 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 COLEC12Q5KU26 742 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 RAP1GAP2Q684P5 730 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 LYSMD2Q8IV50 215 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ZNF683Q8IZ20 524 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 SLC22A15Q8IZD6 547 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ATP6V0D2Q8N8Y2 350 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 POC5Q8NA72 575 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 CLHC1Q8NHS4 586 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 MCFD2Q8NI22 146 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 B3GALT6Q96L58 329 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ZBED2Q9BTP6 218 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 RASSF1Q9NS23 344 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 DCAF13Q9NV06 445 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 M0QX08 132 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 FFAR3O14843 346 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 GPR42O15529 346 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 HMBSP08397 361 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ODC1P11926 461 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 S100A1P23297 94 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 EPHA2P29317 976 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 EIF2DP41214 584 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 CLK3P49761 638 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 MRPS6P82932 125 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 ZNF235Q14590 738 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 SYT6Q5T7P8 510 aaPredicted RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 PSAPL1Q6NUJ1 521 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 CXCL17Q6UXB2 119 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 LINC00299Q6ZSB3 139 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 AKAP14Q86UN6 197 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 RAVER1Q8IY67 606 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 CHPFQ8IZ52 775 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ZNF566Q969W8 418 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 PYCR2Q96C36 320 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ZHX1-C8orf76Q96EF9 292 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 REXO5Q96IC2 774 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 C1orf74Q96LT6 269 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 SERPINB11Q96P15 392 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 DUSP21Q9H596 190 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 ZBTB20Q9HC78 741 aaPredicted RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 ITM2CQ9NQX7 267 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 TMEM248Q9NWD8 314 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 KLHL3Q9UH77 587 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 TRMT6Q9UJA5 497 aaKnown RBP17.44■□□□□ 0.38
VHL-202ENST00000345392 LAMA3Q16787 3333 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 TNFRSF10BO14763 440 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 SNPHO15079 494 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 DIRAS1O95057 198 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 KCNK2O95069 426 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 SPNP16150 400 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 CD36P16671 472 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 MSH3P20585 1137 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 IL2P60568 153 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 HMGCS1Q01581 520 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 GTF2H3Q13889 308 aa17.44■□□□□ 0.38
VHL-202ENST00000345392 SYT16Q17RD7 645 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms