RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CASZ1Q86V15 1759 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SCGNO76038 276 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLITRK5O94991 958 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 HPRP00739 348 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 C1QBP02746 253 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 IFNA6P05013 189 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 WEE2P0C1S8 567 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 BMT2Q1RMZ1 405 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 FAM122BQ7Z309 247 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLC47A1Q96FL8 570 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CPPED1Q9BRF8 314 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ADAM19Q9H013 955 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 VPS26AO75436 327 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PRKRAO75569 313 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TLE3Q04726 772 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ERV3-1Q14264 604 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 HYAL4Q2M3T9 481 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 WDR59Q6PJI9 974 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 QSOX2Q6ZRP7 698 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 MCEMP1Q8IX19 187 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLC22A17Q8WUG5 538 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF845Q96IR2 970 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 DMRTA2Q96SC8 542 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 STRBPQ96SI9 672 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SMDT1Q9H4I9 107 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 POMKQ9H5K3 350 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF408Q9H9D4 720 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RAB6BQ9NRW1 208 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 KCNS2Q9ULS6 477 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SNX24Q9Y343 169 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 A8MU76 341 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SIGLEC6O43699 453 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 MPOP05164 745 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SDC4P31431 198 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SNAPC1Q16533 368 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PTCHD3Q3KNS1 767 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TRAM1L1Q8N609 369 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 OR2T34Q8NGX1 318 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 OR2T3Q8NH03 318 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLC2A9Q9NRM0 540 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TOPORSQ9NS56 1045 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CCDC167Q9P0B6 97 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 A0A1B0GTQ1 180 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RFPL1O75677 317 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 F9P00740 461 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 FSTL1Q12841 308 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TOMM34Q15785 309 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 IQCJQ1A5X6 159 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF404Q494X3 552 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 KLHDC7AQ5VTJ3 777 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ADGRD2Q7Z7M1 963 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZC3H7AQ8IWR0 971 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SLC5A7Q9GZV3 580 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CERS4Q9HA82 394 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GPHNQ9NQX3 736 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 DBR1Q9UK59 544 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 A0A0J9YYE9 177 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GRM8O00222 908 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SEC14L5O43304 696 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 POP4O95707 220 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TRBC1P01850 177 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CYP1A2P05177 515 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RPL3P39023 403 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 BMXP51813 675 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ASAH1Q13510 395 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 KCNC3Q14003 757 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 DSC3Q14574 896 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TRAM2Q15035 370 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 LRRC14Q15048 493 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CHI3L2Q15782 390 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GRIK4Q16099 956 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 FAM26FQ5R3K3 315 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 OR14A2Q96R54 314 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 AGPAT5Q9NUQ2 364 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TAS2R8Q9NYW2 309 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ADGRE2Q9UHX3 823 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF639Q9UID6 485 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 INPP4BO15327 924 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CYCSP99999 105 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PAGE2BQ5JRK9 111 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 POC1BQ8TC44 478 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SMAP2Q8WU79 429 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 C16orf58Q96GQ5 468 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM246Q9BRR3 403 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CBWD1Q9BRT8 395 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TM6SF2Q9BZW4 377 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 SMPD3Q9NY59 655 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 VNN3Q9NY84 501 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 ENPP5Q9UJA9 477 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RNF17Q9BXT8 1623 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TNRQ92752 1358 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RAD51CO43502 376 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 CFBP00751 764 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 C4BPAP04003 597 aaKnown RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 HAPLN1P10915 354 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 FGD3Q5JSP0 725 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RAP1GAP2Q684P5 730 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 PGBD2Q6P3X8 592 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 RIPOR1Q6ZS17 1223 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms