RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 UCK1Q9HA47 277 aa18.28■□□□□ 0.52
CDHR4-201ENST00000343366 PRDM8Q9NQV8 689 aa18.28■□□□□ 0.52
CDHR4-201ENST00000343366 IQCF5A8MTL0 148 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 TRIM38O00635 465 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 NOBOXO60393 691 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 RFPL3O75679 317 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 GP1BAP07359 652 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 CKMT2P17540 419 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 FDXRP22570 491 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 RPL10P27635 214 aaKnown RBP18.27■□□□□ 0.52
CDHR4-201ENST00000343366 DAB2P98082 770 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 TLE3Q04726 772 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 DNAJC3Q13217 504 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 ILKQ13418 452 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 GBX1Q14549 363 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 FAM83HQ6ZRV2 1179 aaPredicted RBP18.27■□□□□ 0.52
CDHR4-201ENST00000343366 TRIM48Q8IWZ4 208 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 KRT222Q8N1A0 295 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 MAGEC3Q8TD91 643 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 CXorf40BQ96DE9 158 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 MTBPQ96DY7 904 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 PAFAH2Q99487 392 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 GPR21Q99679 349 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 MVB12BQ9H7P6 319 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 ARGLU1Q9NWB6 273 aaPredicted RBP18.27■□□□□ 0.52
CDHR4-201ENST00000343366 PADI4Q9UM07 663 aa18.27■□□□□ 0.52
CDHR4-201ENST00000343366 COL12A1Q99715 3063 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 EME2A4GXA9 379 aaPredicted RBP18.26■□□□□ 0.51
CDHR4-201ENST00000343366 VIPP01282 170 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 ITGA2BP08514 1039 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 NUDT17P0C025 328 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 MPC1LP0DKB6 136 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 STMN1P16949 149 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 ITGB6P18564 788 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 ACP1P24666 158 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 HSD17B3P37058 310 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 GPR3P46089 330 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 TARDBPQ13148 414 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDHR4-201ENST00000343366 RASA2Q15283 850 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 TCEA2Q15560 299 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 CCDC157Q569K6 752 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 TTC23LQ6PF05 361 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 UNC5DQ6UXZ4 953 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 SLC35F3Q8IY50 421 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 CACTIN-AS1Q8N1I8 211 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 NKAPQ8N5F7 415 aaKnown RBP18.26■□□□□ 0.51
CDHR4-201ENST00000343366 WDR48Q8TAF3 677 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 CD200R1Q8TD46 325 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 ANKRD7Q92527 254 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 C12orf66Q96MD2 445 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 WWP1Q9H0M0 922 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 EPB41L1Q9H4G0 881 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 SLC17A6Q9P2U8 582 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 CPNE7Q9UBL6 633 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 FAM8A1Q9UBU6 413 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 POLG2Q9UHN1 485 aa18.26■□□□□ 0.51
CDHR4-201ENST00000343366 POC1B-GALNT4F8VUJ3 575 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 TCEA3O75764 348 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 MTHFD1P11586 935 aaKnown RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 JUPP14923 745 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 BRAFP15056 766 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 CRABP2P29373 138 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 CCNFP41002 786 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 IL2P60568 153 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 HHEXQ03014 270 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 KRT33BQ14525 404 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 USP10Q14694 798 aaKnown RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 SEPT7Q16181 437 aaKnown RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 UAP1Q16222 522 aaPredicted RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 RPE65Q16518 533 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 RBM20Q5T481 1227 aaKnown RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 HES3Q5TGS1 186 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 ADGRD1Q6QNK2 874 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 LRRC69Q6ZNQ3 347 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 GPR155Q7Z3F1 870 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 CROCCP2Q86T23 111 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 TBC1D21Q8IYX1 336 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 ARL14Q8N4G2 192 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 KYQ8NBH2 561 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 PHC3Q8NDX5 983 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 LKAAEAR1Q8TD35 194 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 SLC37A2Q8TED4 501 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 NAT14Q8WUY8 206 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 TFGQ92734 400 aaPredicted RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 ATXN7L3BQ96GX2 97 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 PDLIM5Q96HC4 596 aaKnown RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 NDNQ99608 321 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 ROPN1BQ9BZX4 212 aaPredicted RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 EPB41L4BQ9H329 900 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 ROPN1Q9HAT0 212 aaPredicted RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 SIRPGQ9P1W8 387 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 PSMC3IPQ9P2W1 217 aaPredicted RBP18.25■□□□□ 0.51
CDHR4-201ENST00000343366 CDYLQ9Y232 598 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 MED16Q9Y2X0 877 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 BOD1L1Q8NFC6 3051 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 PTPN13Q12923 2485 aa18.25■□□□□ 0.51
CDHR4-201ENST00000343366 IQANK1A0A1B0GTG1 560 aa18.24■□□□□ 0.51
CDHR4-201ENST00000343366 RHPN2P1A8MT19 583 aa18.24■□□□□ 0.51
CDHR4-201ENST00000343366 J3QKU1 62 aa18.24■□□□□ 0.51
CDHR4-201ENST00000343366 SNRPAP09012 282 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms