RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 PGRP06401 933 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ANXA5P08758 320 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ATXN1LP0C7T5 689 aaKnown RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ITIH1P19827 911 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 TPTEP56180 551 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SPANXN2Q5MJ10 180 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ZCCHC8Q6NZY4 707 aaKnown RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 GOLGA7Q7Z5G4 137 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 AKAP14Q86UN6 197 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 CHCHD4Q8N4Q1 142 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 CHDHQ8NE62 594 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 NPLOC4Q8TAT6 608 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 PROX1Q92786 737 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 PAWRQ96IZ0 340 aaKnown RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 USP22Q9UPT9 525 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SH3BP1Q9Y3L3 701 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 PCDHGC4Q9Y5F7 938 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 MAGED1Q9Y5V3 778 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 TCRBV5S2A0A599 114 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 KRBA1A5PL33 1030 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 TMX2-CTNND1H3BSU7 103 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SNPHO15079 494 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 XPNPEP2O43895 674 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 CPSF4O95639 269 aaKnown RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 DBTP11182 482 aaKnown RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SPANXN4Q5MJ08 99 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 RSBN1Q5VWQ0 802 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF621Q6ZSS3 439 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 LRRTM3Q86VH5 581 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SYTL1Q8IYJ3 562 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 RBFAQ8N0V3 343 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ZNF513Q8N8E2 541 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 TTC29Q8NA56 475 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ATAD1Q8NBU5 361 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 MTFMTQ96DP5 389 aaKnown RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 REXO5Q96IC2 774 aaKnown RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 TSSK3Q96PN8 268 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ASB8Q9H765 288 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 NECTIN3Q9NQS3 549 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 HEBP1Q9NRV9 189 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 POLR3BQ9NW08 1133 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 WBP1LQ9NX94 342 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SMPD4Q9NXE4 827 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 PNMA8BQ9ULN7 279 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SNX6Q9UNH7 406 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 CPQQ9Y646 472 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 SERPINB7O75635 380 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 INMTO95050 263 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 HRH2P25021 359 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 GSSP48637 474 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 HMGCS1Q01581 520 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 CACNG1Q06432 222 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 TBPL2Q6SJ96 375 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 ENPP6Q6UWR7 440 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 HTRA1Q92743 480 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 NELL1Q92832 810 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 FATE1Q969F0 183 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 MYDGFQ969H8 173 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 IGSF8Q969P0 613 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 CCDC97Q96F63 343 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 OSBPL10Q9BXB5 764 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 RASSF1Q9NS23 344 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 PDP1Q9P0J1 537 aaPredicted RBP9.26□□□□□ -0.93
TRERF1-201ENST00000340840 PSME4Q14997 1843 aa9.26□□□□□ -0.93
TRERF1-201ENST00000340840 LOC100506127A0A0U1RQW1 187 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 IGLV3-25P01717 112 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PRSS56P0CW18 603 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ATP5C1P36542 298 aaKnown RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 HPCAL1P37235 193 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 HTR6P50406 440 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 SUOXP51687 545 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 BTG3Q14201 252 aaPredicted RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 TYSND1Q2T9J0 566 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ARMC12Q5T9G4 340 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ELMSAN1Q6PJG2 1045 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 USP51Q70EK9 711 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 AHSA2Q719I0 299 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PIWIL3Q7Z3Z3 882 aaKnown RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 OR9Q1Q8NGQ5 310 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ERLEC1Q96DZ1 483 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 TPD52L3Q96J77 140 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 TEX37Q96LM6 180 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 EXOSC4Q9NPD3 245 aaKnown RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ADPRHL2Q9NX46 363 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ARL15Q9NXU5 204 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 FAM32AQ9Y421 112 aaKnown RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PCDHB9Q9Y5E1 797 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 CLDN11O75508 207 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 GNRH1P01148 92 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 CD36P16671 472 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 AFF1P51825 1210 aaKnown RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ERVPABLB-1P60509 514 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 RPS14P62263 151 aaKnown RBP9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PTGR1Q14914 329 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PLEKHG6Q3KR16 790 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 FAM171A1Q5VUB5 890 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 ANKRD13BQ86YJ7 626 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PHYKPLQ8IUZ5 450 aa9.25□□□□□ -0.93
TRERF1-201ENST00000340840 PIK3C3Q8NEB9 887 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms