RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CACHD1Q5VU97 1274 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RSPO2Q6UXX9 243 aaPredicted RBP14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RIMKLAQ8IXN7 391 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 C10orf111Q8N326 155 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RAB2BQ8WUD1 216 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ADGRE3Q9BY15 652 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RAD51BO15315 384 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF623O75123 536 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 CPSF4O95639 269 aaKnown RBP14.12□□□□□ -0.15
CPSF7-201ENST00000340437 GLUD1P00367 558 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 PGRP06401 933 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 CA5AP35218 305 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ATP5C1P36542 298 aaKnown RBP14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ACVR1Q04771 509 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RAPSNQ13702 412 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 CES5AQ6NT32 575 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ANGPTL8Q6UXH0 198 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 NECAB2Q7Z6G3 386 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 SERPINA9Q86WD7 417 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 SCML4Q8N228 414 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 OR7A2PQ8NGA2 310 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 INPP5KQ9BT40 448 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 MIR1-1HGQ9H1L0 117 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 DNAJB9Q9UBS3 223 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 BLOC1S6Q9UL45 172 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 PRMT5O14744 637 aaPredicted RBP14.12□□□□□ -0.15
CPSF7-201ENST00000340437 NDUFS2O75306 463 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 DUSP11O75319 330 aaKnown RBP14.12□□□□□ -0.15
CPSF7-201ENST00000340437 OTCP00480 354 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 IDUAP35475 653 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 TMED10P49755 219 aaKnown RBP14.12□□□□□ -0.15
CPSF7-201ENST00000340437 USP51Q70EK9 711 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 DEFB128Q7Z7B8 93 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 GALNT7Q86SF2 657 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RTN4RL1Q86UN2 441 aaPredicted RBP14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RGL4Q8IZJ4 473 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ARL10Q8N8L6 244 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 PSD4Q8NDX1 1056 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 NDNFQ8TB73 568 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ELMO1Q92556 727 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 RORBQ92753 470 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF382Q96SR6 550 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 EBPLQ9BY08 206 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 POPDC3Q9HBV1 291 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 CRLS1Q9UJA2 301 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF229Q9UJW7 825 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 PRSS21Q9Y6M0 314 aa14.12□□□□□ -0.15
CPSF7-201ENST00000340437 H0YAE9 185 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 BCKDKO14874 412 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 KDM1AO60341 852 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 TULP3O75386 442 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 PRAMEF1O95521 474 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 ANGPTL1O95841 491 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 PRR35P0CG20 571 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 MZF1P28698 734 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 CORO1AP31146 461 aaKnown RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 PON2Q15165 354 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 PRR23BQ6ZRT6 265 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 RBM12BQ8IXT5 1001 aaKnown RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 TERB1Q8NA31 727 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 ST13P5Q8NFI4 369 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 ZFP90Q8TF47 636 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 TPD52L3Q96J77 140 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 PSKH2Q96QS6 385 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 HERC2P3Q9BVR0 1158 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 MUC13Q9H3R2 512 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 ELOVL2Q9NXB9 296 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 CDH7Q9ULB5 785 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 DRGXA6NNA5 263 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 RGS14O43566 566 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 EPOP01588 193 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 SKIV2LQ15477 1246 aaKnown RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 SF1Q15637 639 aaKnown RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 COQ5Q5HYK3 327 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 ADAMTS16Q8TE57 1224 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 EGLN2Q96KS0 407 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 MBOAT4Q96T53 435 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 LRTM1Q9HBL6 345 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 KIF17Q9P2E2 1029 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 TRIM17Q9Y577 477 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 IGLV3-10A0A075B6K4 115 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 TRIM43BA6NCK2 446 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 CREG1O75629 220 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 JAK1P23458 1154 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 GNPDA1P46926 289 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 MAPKAPK2P49137 400 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 TMBIM6P55061 237 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 COL9A2Q14055 689 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 ZCCHC8Q6NZY4 707 aaKnown RBP14.11□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF540Q8NDQ6 660 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 GTF2H4Q92759 462 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 WBP2Q969T9 261 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 C8orf48Q96LL4 319 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 SLC25A37Q9NYZ2 338 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 LRFN2Q9ULH4 789 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 PCDHB14Q9Y5E9 798 aa14.11□□□□□ -0.15
CPSF7-201ENST00000340437 FLT3LGP49771 235 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 SUSD1Q6UWL2 747 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ADHFE1Q8IWW8 467 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms