RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ACTR10Q9NZ32 417 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 TUBD1Q9UJT1 453 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 KCND3Q9UK17 655 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 ICKQ9UPZ9 632 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 POLHQ9Y253 713 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 BTRCQ9Y297 605 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 TDRKHQ9Y2W6 561 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 PCDHGA6Q9Y5G7 932 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 HEBP2Q9Y5Z4 205 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 TNRC6AQ8NDV7 1962 aaKnown RBP12.96□□□□□ -0.34
NUDCD3-201ENST00000338427 ASH1LQ9NR48 2969 aaKnown RBP12.96□□□□□ -0.34
NUDCD3-201ENST00000338427 SLC5A10A0PJK1 596 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 KLHL33A6NCF5 533 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 ARGFXA6NJG6 315 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 MEN1O00255 615 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 MT-ND3P03897 115 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 CAPN1P07384 714 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 STIP1P31948 543 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 KCNJ1P48048 391 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 CD151P48509 253 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 CCL11P51671 97 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 TERF1P54274 439 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 FOXL2P58012 376 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 P3H1Q32P28 736 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 PTCHD3Q3KNS1 767 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 LACTB2Q53H82 288 aaPredicted RBP12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 BPHLQ86WA6 291 aaPredicted RBP12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 VRK3Q8IV63 474 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 RNF10Q8N5U6 811 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 C19orf43Q9BQ61 176 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 MVB12BQ9H7P6 319 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 CHRAC1Q9NRG0 131 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 KLHL20Q9Y2M5 609 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 SEC16AO15027 2179 aa12.95□□□□□ -0.34
NUDCD3-201ENST00000338427 CPNE3O75131 537 aaKnown RBP12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 SUN1O94901 812 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 AP2A2O94973 939 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CBSLP0DN79 551 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CDC25BP30305 580 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CCR7P32248 378 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CBSP35520 551 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 NSG1P42857 185 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 MLLT10P55197 1068 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 RPS15P62841 145 aaKnown RBP12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CRADDP78560 199 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CDH17Q12864 832 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 SEMA5AQ13591 1074 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 DEFB110Q30KQ9 67 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 SEL1L2Q5TEA6 688 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 MEI1Q5TIA1 1274 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CES3Q6UWW8 571 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 LINC00523Q86TU6 105 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 DSELQ8IZU8 1212 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 ENDOVQ8N8Q3 282 aaKnown RBP12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 OR4L1Q8NH43 312 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 FLVCR1-AS1Q8TAF5 88 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 LRRC45Q96CN5 670 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CLIP3Q96DZ5 547 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 OR2A14Q96R47 310 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CASS4Q9NQ75 786 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 PCMTD2Q9NV79 361 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 MARCH4Q9P2E8 410 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 PLAAQ9Y263 795 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 ASF1AQ9Y294 204 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 CCDC88CQ9P219 2028 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 COL12A1Q99715 3063 aa12.94□□□□□ -0.34
NUDCD3-201ENST00000338427 C2orf74A8MZ97 194 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 C21orf140B9A014 251 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 E7EVH7 732 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 MASP2O00187 686 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ARHGAP6O43182 974 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ZNF749O43361 778 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 KLK3P07288 261 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 UGT2B7P16662 529 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ADRA1DP25100 572 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 PEBP1P30086 187 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 RORAP35398 523 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 FDFT1P37268 417 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 CASRP41180 1078 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 SESN2P58004 480 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 RPA4Q13156 261 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ITIH4Q14624 930 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 RPS6KA1Q15418 735 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 UGT8Q16880 541 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 C1orf189Q5VU69 101 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ZNF449Q6P9G9 518 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ZNF517Q6ZMY9 492 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ASB18Q6ZVZ8 466 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 CFAP61Q8NHU2 1237 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 IL17FQ96PD4 163 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 GPR87Q9BY21 358 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 PITPNM3Q9BZ71 974 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 ACTR5Q9H9F9 607 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
NUDCD3-201ENST00000338427 SERTAD3Q9UJW9 196 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms