RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 AGAP7PQ5VUJ5 663 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 BTLAQ7Z6A9 289 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 FCRL2Q96LA5 508 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 UCK2Q9BZX2 261 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 NXF3Q9H4D5 531 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 MCUBQ9NWR8 336 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 NFKBIL1Q9UBC1 381 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 TNPO3Q9Y5L0 923 aaKnown RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
COL2A1-201ENST00000337299 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-201ENST00000337299 ACOT8O14734 319 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 SLITRK5O94991 958 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 GADD45AP24522 165 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 ERVK-8P63133 956 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.32
COL2A1-201ENST00000337299 PTSQ03393 145 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 RAPSNQ13702 412 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 PAQR3Q6TCH7 311 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 ENPP6Q6UWR7 440 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 UNC93AQ86WB7 457 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 CELF2-AS1Q8N7Q2 184 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 DNAJB3Q8WWF6 145 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 AP3S1Q92572 193 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 SLC30A3Q99726 388 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 WACQ9BTA9 647 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 MRPL9Q9BYD2 267 aaKnown RBP13.02□□□□□ -0.32
COL2A1-201ENST00000337299 LRTM1Q9HBL6 345 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 ARMC1Q9NVT9 282 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 KCNH4Q9UQ05 1017 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 TCRBV3S1A0A5B6 114 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 DFNA5O60443 496 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 VIPP01282 170 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 OPN1SWP03999 348 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 SLC2A2P11168 524 aaPredicted RBP13.02□□□□□ -0.32
COL2A1-201ENST00000337299 GPC1P35052 558 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 PITX1P78337 314 aaPredicted RBP13.02□□□□□ -0.32
COL2A1-201ENST00000337299 BEX3Q00994 111 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 HSPA14Q0VDF9 509 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 HIST2H2ACQ16777 129 aaPredicted RBP13.02□□□□□ -0.32
COL2A1-201ENST00000337299 CRTC2Q53ET0 693 aaPredicted RBP13.02□□□□□ -0.32
COL2A1-201ENST00000337299 TTC23LQ6PF05 361 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 CTU1Q7Z7A3 348 aaKnown RBP13.02□□□□□ -0.32
COL2A1-201ENST00000337299 IQCF2Q8IXL9 164 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 BPIFB1Q8TDL5 484 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 PIGKQ92643 395 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 FZD10Q9ULW2 581 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 USP22Q9UPT9 525 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 B3GNT3Q9Y2A9 372 aa13.02□□□□□ -0.32
COL2A1-201ENST00000337299 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 FAM92AA1XBS5 289 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 GSAPA4D1B5 854 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 OR7A10O76100 309 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 HOXB8P17481 243 aaPredicted RBP13.02□□□□□ -0.33
COL2A1-201ENST00000337299 ARL2P36404 184 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 MVKQ03426 396 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 MAB21L1Q13394 359 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.33
COL2A1-201ENST00000337299 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 GALNT10Q86SR1 603 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 DTX3Q8N9I9 347 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 FCGR1BQ92637 280 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 SLC38A4Q969I6 547 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.33
COL2A1-201ENST00000337299 FAM126AQ9BYI3 521 aaPredicted RBP13.02□□□□□ -0.33
COL2A1-201ENST00000337299 TBC1D17Q9HA65 648 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 PRDM16Q9HAZ2 1276 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 PCDHGB6Q9Y5F9 930 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 ROBO1Q9Y6N7 1651 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 IQCF5A8MTL0 148 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 TNFRSF10AO00220 468 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 PRKCGP05129 697 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 PROZP22891 400 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 THPOP40225 353 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 CASP3P42574 277 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 GLUD2P49448 558 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 RORCP51449 518 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 DEFA5Q01523 94 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 TUBB3Q13509 450 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 ALFQ53S48 1182 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 CES5AQ6NT32 575 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 MZT2AQ6P582 158 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 VN1R5Q7Z5H4 357 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 MFSD2AQ8NA29 543 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 OR4K2Q8NGD2 314 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF431Q8TF32 576 aaPredicted RBP13.02□□□□□ -0.33
COL2A1-201ENST00000337299 TMEM209Q96SK2 561 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 POLR1EQ9GZS1 481 aaKnown RBP13.02□□□□□ -0.33
COL2A1-201ENST00000337299 MKL2Q9ULH7 1088 aa13.02□□□□□ -0.33
COL2A1-201ENST00000337299 PLIN4Q96Q06 1357 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 EIF3FO00303 357 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 PRMT5O14744 637 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 TOXO94900 526 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CDRT1O95170 752 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF135P52742 658 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms