RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 LSM3P62310 102 aaKnown RBP16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 EMX2Q04743 252 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 NDUFA5Q16718 116 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 MEP1AQ16819 746 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 RNF219Q5W0B1 726 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 THAP5Q7Z6K1 395 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 CIPCQ9C0C6 399 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 MED16Q9Y2X0 877 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 LOC105371267A0A1B0GV96 52 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 STX16O14662 325 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 ACSL4O60488 711 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 RAP2AP10114 183 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 CDH1P12830 882 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 HTR1EP28566 365 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 MLLT3P42568 568 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 MLLT10P55197 1068 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 RACK1P63244 317 aaKnown RBP16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 GTF2H2Q13888 395 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 GTF2H3Q13889 308 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 ARHGEF7Q14155 803 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 ABRAXAS2Q15018 415 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 TYSND1Q2T9J0 566 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 GTF2H2CQ6P1K8 395 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 R3HCC1LQ7Z5L2 792 aaKnown RBP16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 SGCDQ92629 289 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 GLT1D1Q96MS3 346 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 PSKH2Q96QS6 385 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 UGT2B28Q9BY64 529 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 GPR62Q9BZJ7 368 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 TOR3AQ9H497 397 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 UCKL1Q9NWZ5 548 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 GNPTGQ9UJJ9 305 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 ORC6Q9Y5N6 252 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 MYLKQ15746 1914 aa16.22■□□□□ 0.19
CDC42EP4-201ENST00000335793 MATN1P21941 496 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SLC6A4P31645 630 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SUOXP51687 545 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ZNF140P52738 457 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ACVR1Q04771 509 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SETMARQ53H47 684 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 COQ5Q5HYK3 327 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ENPP6Q6UWR7 440 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ZFAND4Q86XD8 727 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 PHACTR4Q8IZ21 702 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 CARNMT1Q8N4J0 409 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SPERTQ8NA61 448 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 PEX13Q92968 403 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 PMEPA1Q969W9 287 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 MAGEH1Q9H213 219 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 TRIT1Q9H3H1 467 aaKnown RBP16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SPEF1Q9Y4P9 236 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 PCDHGA11Q9Y5H2 935 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 IGLV3-10A0A075B6K4 115 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 DRGXA6NNA5 263 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 MYO1GB0I1T2 1018 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 TPPPO94811 219 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 OAZ2O95190 189 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SHMT2P34897 504 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SEMG2Q02383 582 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 FOXD4Q12950 439 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 MOGQ16653 247 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ELMOD1Q8N336 334 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 FAM86B1Q8N7N1 296 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 CD200R1Q8TD46 325 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 TSPEARQ8WU66 669 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 VAPAQ9P0L0 249 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 IFT52Q9Y366 437 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 TCRBV5S2A0A599 114 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 E2F3O00716 465 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 RAD51BO15315 384 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ALPIP09923 528 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 TCF3P15923 654 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 IDUAP35475 653 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 HLCSP50747 726 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ALDH3A2P51648 485 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 RHOAP61586 193 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 IL5RAQ01344 420 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 CPSF6Q16630 551 aaKnown RBP eCLIP16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ANKRD34AQ69YU3 496 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 GOLGA7Q7Z5G4 137 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ANKRD46Q86W74 232 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 SOCS4Q8WXH5 440 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 CRISPLD1Q9H336 500 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ACTR8Q9H981 624 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 HPS4Q9NQG7 708 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 ITM2CQ9NQX7 267 aa16.21■□□□□ 0.19
CDC42EP4-201ENST00000335793 PRMT5O14744 637 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 PRKD3O94806 890 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 GJB5O95377 273 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 HOXD9P28356 352 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 OPRL1P41146 370 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC13A2Q13183 592 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 TTC23Q5W5X9 447 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 SULT1C3Q6IMI6 304 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 SLC24A5Q71RS6 500 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 HDAC2Q92769 488 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 AURKBQ96GD4 344 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 ASB8Q9H765 288 aa16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 DDX28Q9NUL7 540 aaKnown RBP16.2■□□□□ 0.18
CDC42EP4-201ENST00000335793 FAM8A1Q9UBU6 413 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms