RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PAOXQ6QHF9 649 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 ZMIZ2Q8NF64 920 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 ADAM7Q9H2U9 754 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 TAC3Q9UHF0 121 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 PPM1HQ9ULR3 514 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 U3KQV3 271 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 TCRBV21S2A2A0A5A6 115 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 KERAO60938 352 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 PRKCHP24723 683 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TALDO1P37837 337 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 GSTM5P46439 218 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 AFF1P51825 1210 aaKnown RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SLC9A5Q14940 896 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 NXPE1Q8N323 547 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TTLQ8NG68 377 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 OR4E2Q8NGC2 313 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 LRIG1Q96JA1 1093 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SIGLEC10Q96LC7 697 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 KIFC1Q9BW19 673 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SLC2A11Q9BYW1 496 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SLC32A1Q9H598 525 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 IKZF3Q9UKT9 509 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SLX4Q8IY92 1834 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 ATXN2Q99700 1313 aaKnown RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 NFKB2Q00653 900 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 CREB5Q02930 508 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TMEM25Q86YD3 366 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SAMD14Q8IZD0 417 aaPredicted RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 C11orf65Q8NCR3 313 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 BPIFB6Q8NFQ5 453 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 DCAKDQ8WVC6 231 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SLC47A1Q96FL8 570 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 PRRG4Q9BZD6 226 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 GALPQ9UBC7 116 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 MCIDASD6RGH6 385 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TOP3BO95985 862 aaKnown RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 BDKRB1P46663 353 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 CACNA2D1P54289 1103 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TMEM115Q12893 351 aaPredicted RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 NR1D2Q14995 579 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 FAM174BQ3ZCQ3 159 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 CILP2Q8IUL8 1156 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TRPV1Q8NER1 839 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 MTERF3Q96E29 417 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TDRD1Q9BXT4 1180 aaKnown RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 RETREG1Q9H6L5 497 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 ELOVL7A1L3X0 281 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 ENO4A6NNW6 628 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TMEM150CB9EJG8 249 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 EN2P19622 333 aaPredicted RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TPP2P29144 1249 aaPredicted RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 HMGCS1Q01581 520 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 TCEAL1Q15170 157 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 SMYD5Q6GMV2 418 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 CNTD1Q8N815 330 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 RBM15BQ8NDT2 890 aaKnown RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 CASD1Q96PB1 797 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 PIAS3Q9Y6X2 628 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 MYH6P13533 1939 aa14.73□□□□□ -0.05
C9orf47-201ENST00000334490 MAP1BP46821 2468 aaKnown RBP14.73□□□□□ -0.05
C9orf47-201ENST00000334490 A8MT66 165 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 MAN2B1O00754 1011 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 LIN7AO14910 233 aaPredicted RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 DCLK1O15075 740 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 GMFGO60234 142 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 ETV3P41162 512 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 MAGEA10P43363 369 aaPredicted RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 PGDP52209 483 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 RGS8P57771 180 aaPredicted RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 GPX6P59796 221 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 MRPS15P82914 257 aaKnown RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 MRPL28Q13084 256 aaKnown RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 TMEM164Q5U3C3 297 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 AVL9Q8NBF6 648 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 C3orf58Q8NDZ4 430 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 SETD7Q8WTS6 366 aaKnown RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 IMP4Q96G21 291 aaKnown RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 COPS7AQ9UBW8 275 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 PCDH7O60245 1069 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 UGT2B17O75795 530 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 PAPSS2O95340 614 aaPredicted RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 PCSK2P16519 638 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 HNF1BP35680 557 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 DGCR6Q14129 220 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 INAQ16352 499 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 RAB7BQ96AH8 199 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 CEP295NLQ96MC4 621 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 C5orf34Q96MH7 638 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 TMEM27Q9HBJ8 222 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 CA14Q9ULX7 337 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 CAB39Q9Y376 341 aaPredicted RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 TTC34A8MYJ7 566 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 AGPSO00116 658 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 LATS1O95835 1130 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 EDN1P05305 212 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 ZNF24P17028 368 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 PHF19Q5T6S3 580 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 FAM171BQ6P995 826 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 UBR7Q8N806 425 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 SMYD1Q8NB12 490 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms