RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 EXO5Q9H790 373 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 OXSMQ9NWU1 459 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 HCFC1R1Q9NWW0 138 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 SAMD4AQ9UPU9 718 aaKnown RBP11.01□□□□□ -0.65
POLR1B-202ENST00000333990 KCNK6Q9Y257 313 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 KCTD3Q9Y597 815 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 PRR5-ARHGAP8B1AHC4 643 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 C9J4A7 227 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 SIN3BO75182 1162 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 SERPINI2O75830 405 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 IL6P05231 212 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 CEBPBP17676 345 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 GKP32189 559 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 SHMT2P34897 504 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 MAGEA10P43363 369 aaPredicted RBP11.01□□□□□ -0.65
POLR1B-202ENST00000333990 ARHGAP8P85298 464 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 RPL6Q02878 288 aaKnown RBP11.01□□□□□ -0.65
POLR1B-202ENST00000333990 SLBPQ14493 270 aaKnown RBP eCLIP11.01□□□□□ -0.65
POLR1B-202ENST00000333990 ADCK1Q86TW2 530 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 APCDD1Q8J025 514 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 ST13P5Q8NFI4 369 aaPredicted RBP11.01□□□□□ -0.65
POLR1B-202ENST00000333990 CLHC1Q8NHS4 586 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 PHF10Q8WUB8 498 aaKnown RBP11.01□□□□□ -0.65
POLR1B-202ENST00000333990 EXOSC8Q96B26 276 aaKnown RBP11.01□□□□□ -0.65
POLR1B-202ENST00000333990 TBC1D10AQ9BXI6 508 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 ABI3Q9P2A4 366 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 DHRS7Q9Y394 339 aa11.01□□□□□ -0.65
POLR1B-202ENST00000333990 TTC34A8MYJ7 566 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SRCP12931 536 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PSMD4P55036 377 aaKnown RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 TTC23Q5W5X9 447 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ARMCX6Q7L4S7 300 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ALYREFQ86V81 257 aaKnown RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 HEATR4Q86WZ0 1026 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 GATAD2AQ86YP4 633 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 FAM20CQ8IXL6 584 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ZCCHC10Q8TBK6 192 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SPPL3Q8TCT6 385 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 LMX1AQ8TE12 382 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 RASSF5Q8WWW0 418 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ISG20Q96AZ6 181 aaKnown RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 SCRN2Q96FV2 425 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PCDHB11Q9Y5F2 797 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 MYH10P35580 1976 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 DRGXA6NNA5 263 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PRMT3O60678 531 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 AGXTP21549 392 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 CLCN4P51793 760 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SLC10A2Q12908 348 aaPredicted RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 PUS10Q3MIT2 529 aaKnown RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 TMEM240Q5SV17 173 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 CAPRIN2Q6IMN6 1127 aaKnown RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 AGTRAPQ6RW13 159 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 IZUMO2Q6UXV1 221 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 CAND1Q86VP6 1230 aaKnown RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 FAM129CQ86XR2 697 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 TRPV3Q8NET8 790 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 VN1R2Q8NFZ6 395 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SHKBP1Q8TBC3 707 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ESAMQ96AP7 390 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 MRPL38Q96DV4 380 aaKnown RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 CMTM7Q96FZ5 175 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PDP2Q9P2J9 529 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 C3orf18Q9UK00 162 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 CA14Q9ULX7 337 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PCDHGA2Q9Y5H1 932 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 GON4LQ3T8J9 2241 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 PIP5K1BO14986 540 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 CCNYL3P0C7X3 344 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 BMP7P18075 431 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PRDX6P30041 224 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PLA2G16P53816 162 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 GPX6P59796 221 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 MLLT1Q03111 559 aaPredicted RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 ZNF252P-AS1Q0IIN9 211 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 FBXO48Q5FWF7 155 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 TCEAL5Q5H9L2 206 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 BRWD3Q6RI45 1802 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ABHD13Q7L211 337 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 CLNKQ7Z7G1 428 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 KIAA2013Q8IYS2 634 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ZNF781Q8N8C0 355 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 TMEM145Q8NBT3 493 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 OR9A1PQ8NGU1 263 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SCAMP4Q969E2 229 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ARMC5Q96C12 935 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 MARCH5Q9NX47 278 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SIRPGQ9P1W8 387 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 VPS29Q9UBQ0 182 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 COPS7AQ9UBW8 275 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 TPRKBQ9Y3C4 175 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SDK1Q7Z5N4 2213 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 A8MT66 165 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 CXorf49A8MYA2 514 aaPredicted RBP11□□□□□ -0.65
POLR1B-202ENST00000333990 E7ESA3 106 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 SLC22A2O15244 555 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 ZMPSTE24O75844 475 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 APOA1P02647 267 aa11□□□□□ -0.65
POLR1B-202ENST00000333990 PTX3P26022 381 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms