RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 FNDC5Q8NAU1 212 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 CELF6Q96J87 481 aaKnown RBP23.89■■□□□ 1.42
SOX1-201ENST00000330949 SLC2A13Q96QE2 648 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 NFKBIZQ9BYH8 718 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 C14orf119Q9NWQ9 140 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 TBC1D24Q9ULP9 559 aa23.89■■□□□ 1.42
SOX1-201ENST00000330949 IFRD1O00458 451 aaPredicted RBP23.89■■□□□ 1.41
SOX1-201ENST00000330949 CYP2C18P33260 490 aa23.89■■□□□ 1.41
SOX1-201ENST00000330949 PARP15Q460N3 678 aa23.89■■□□□ 1.41
SOX1-201ENST00000330949 DET1Q7L5Y6 550 aa23.89■■□□□ 1.41
SOX1-201ENST00000330949 CCDC190Q86UF4 302 aa23.89■■□□□ 1.41
SOX1-201ENST00000330949 ESX1Q8N693 406 aa23.89■■□□□ 1.41
SOX1-201ENST00000330949 FKBP14Q9NWM8 211 aa23.89■■□□□ 1.41
SOX1-201ENST00000330949 PCDHGB2Q9Y5G2 931 aa23.89■■□□□ 1.41
SOX1-201ENST00000330949 PCM1Q15154 2024 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 A0A1B0GTL3 188 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 C22orf31O95567 290 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 ITGB6P18564 788 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 POLR2CP19387 275 aaPredicted RBP23.88■■□□□ 1.41
SOX1-201ENST00000330949 KRT20P35900 424 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 RPS5P46782 204 aaKnown RBP23.88■■□□□ 1.41
SOX1-201ENST00000330949 TARDBPQ13148 414 aaKnown RBP eCLIP23.88■■□□□ 1.41
SOX1-201ENST00000330949 TSPYL5Q86VY4 417 aaPredicted RBP23.88■■□□□ 1.41
SOX1-201ENST00000330949 ELMO1Q92556 727 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 OR2A14Q96R47 310 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 SDHCQ99643 169 aaPredicted RBP23.88■■□□□ 1.41
SOX1-201ENST00000330949 A0A0G2JMP0 313 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 A0A1W2PQ72 361 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 MEIOCA2RUB1 952 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 PMPCBO75439 489 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 MYCLP1P12525 358 aaPredicted RBP23.88■■□□□ 1.41
SOX1-201ENST00000330949 SOX6P35712 828 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 HNF4AP41235 474 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 IL1RL1Q01638 556 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 PROX2Q3B8N5 592 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 CYP4Z1Q86W10 505 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 SULF1Q8IWU6 871 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 WDR6Q9NNW5 1121 aaKnown RBP23.88■■□□□ 1.41
SOX1-201ENST00000330949 RGS18Q9NS28 235 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 DNMT3LQ9UJW3 386 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 FBXW11Q9UKB1 542 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 ELOVL7A1L3X0 281 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 FADS2P1A8MWK0 482 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 I6L893 689 aaPredicted RBP23.88■■□□□ 1.41
SOX1-201ENST00000330949 CXCR6O00574 342 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 HBP1O60381 514 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 UROSP10746 265 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 OR4D1Q15615 310 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 ANKS6Q68DC2 871 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 PAF1Q8N7H5 531 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 TRAPPC4Q9Y296 219 aa23.88■■□□□ 1.41
SOX1-201ENST00000330949 TSC2P49815 1807 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 C12orf71A8MTZ7 269 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 CSNK2BP67870 215 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 TIGD6Q17RP2 521 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 HABP4Q5JVS0 413 aaKnown RBP23.87■■□□□ 1.41
SOX1-201ENST00000330949 C6orf136Q5SQH8 315 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 CYP20A1Q6UW02 462 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 OR8H2Q8N162 312 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 DEPDC4Q8N2C3 294 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 OR10A6Q8NH74 314 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 POP5Q969H6 163 aaKnown RBP23.87■■□□□ 1.41
SOX1-201ENST00000330949 CEP19Q96LK0 163 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 GABARAPL1Q9H0R8 117 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 SLC7A4O43246 635 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 RETP07949 1114 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 CCNCP24863 283 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 RABGGTBP53611 331 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 ARMC4Q5T2S8 1044 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 RANBP10Q6VN20 620 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 PLPPR4Q7Z2D5 763 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 CACTIN-AS1Q8N1I8 211 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 LSM14AQ8ND56 463 aaKnown RBP23.87■■□□□ 1.41
SOX1-201ENST00000330949 FLCNQ8NFG4 579 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 ST13P5Q8NFI4 369 aaPredicted RBP23.87■■□□□ 1.41
SOX1-201ENST00000330949 THUMPD3Q9BV44 507 aaKnown RBP23.87■■□□□ 1.41
SOX1-201ENST00000330949 ATXN3LQ9H3M9 355 aa23.87■■□□□ 1.41
SOX1-201ENST00000330949 BRCA1P38398 1863 aaKnown RBP23.86■■□□□ 1.41
SOX1-201ENST00000330949 SHOXO15266 292 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 CNMDO75829 334 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 ARHGDIAP52565 204 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 GPAT3Q53EU6 434 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 SLC7A6Q92536 515 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 NEDD4LQ96PU5 975 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 ATOH8Q96SQ7 321 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 SLC30A2Q9BRI3 323 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 DCAF13Q9NV06 445 aaKnown RBP23.86■■□□□ 1.41
SOX1-201ENST00000330949 ERVK13-1Q9NX77 482 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 NDRG4Q9ULP0 352 aaKnown RBP23.86■■□□□ 1.41
SOX1-201ENST00000330949 RABL2BQ9UNT1 228 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 LOC100506127A0A0U1RQW1 187 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 M0R082 166 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 TPPPO94811 219 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 TIE1P35590 1138 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 AP2S1P53680 142 aaPredicted RBP23.86■■□□□ 1.41
SOX1-201ENST00000330949 HSPA14Q0VDF9 509 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 TBCEQ15813 527 aaPredicted RBP23.86■■□□□ 1.41
SOX1-201ENST00000330949 SLC46A3Q7Z3Q1 461 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 KDELC2Q7Z4H8 507 aa23.86■■□□□ 1.41
SOX1-201ENST00000330949 APPL2Q8NEU8 664 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms