RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C17orf53Q8N3J3 647 aaPredicted RBP26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 D2HGDHQ8N465 521 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 ESX1Q8N693 406 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 OR5K2Q8NHB8 316 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 ELMO2Q96JJ3 720 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 TCF12Q99081 682 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 DDX47Q9H0S4 455 aaKnown RBP26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 C1GALT1Q9NS00 363 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 RARRES3Q9UL19 164 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 SAR1BQ9Y6B6 198 aa26.82■■□□□ 1.88
ATPAF1-201ENST00000329231 TK2O00142 265 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 BTN3A3O00478 584 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 BTN3A1O00481 513 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 KDM1AO60341 852 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 GPC4O75487 556 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 FOLR1P15328 257 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 CDH3P22223 829 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 AOAHP28039 575 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 ABHD18Q0P651 414 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 KCNAB1Q14722 419 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 TAF1BQ53T94 588 aaPredicted RBP26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 DNAJC21Q5F1R6 531 aaKnown RBP26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 TMTC4Q5T4D3 741 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 TIPARPQ7Z3E1 657 aaKnown RBP26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 KRT222Q8N1A0 295 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 NAT8LQ8N9F0 302 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 LKAAEAR1Q8TD35 194 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 KIAA1143Q96AT1 154 aaPredicted RBP26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 WBP1Q96G27 269 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 XKR8Q9H6D3 395 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 PCYOX1Q9UHG3 505 aa26.81■■□□□ 1.88
ATPAF1-201ENST00000329231 IGSF10Q6WRI0 2623 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 C2orf74A8MZ97 194 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 GOLGA8KD6RF30 607 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 GOLGA8TH3BQL2 631 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 KPNA5O15131 536 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 SPAG6O75602 509 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 EBLN1P0CF75 366 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 LIFP15018 202 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 PRDX3P30048 256 aaKnown RBP26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 SHMT2P34897 504 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 EIF3BP55884 814 aaKnown RBP26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 DHX34Q14147 1143 aaKnown RBP26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 TYSND1Q2T9J0 566 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 SLCO2A1Q92959 643 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 CAPZA3Q96KX2 299 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 FCRL4Q96PJ5 515 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 EFHD1Q9BUP0 239 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 FGF21Q9NSA1 209 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 SOHLH2Q9NX45 425 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 ASIC3Q9UHC3 531 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 ICKQ9UPZ9 632 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 CDYLQ9Y232 598 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 TDRKHQ9Y2W6 561 aaKnown RBP26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 LOC400499M0QZD8 3231 aa26.8■■□□□ 1.88
ATPAF1-201ENST00000329231 RPN2P04844 631 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 WT1P19544 449 aaPredicted RBP26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 OGNP20774 298 aaKnown RBP26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 MAGEA3P43357 314 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 ANKRD20A4Q4UJ75 823 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 NEPROQ6NW34 567 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 C6orf15Q6UXA7 325 aaPredicted RBP26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 ADGRF3Q8IZF5 1079 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 GSDMBQ8TAX9 411 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 SLC39A7Q92504 469 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 TTC9Q92623 222 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 ZNF669Q96BR6 464 aaPredicted RBP26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 PPM1MQ96MI6 270 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 NRTNQ99748 197 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 GPN2Q9H9Y4 310 aaPredicted RBP26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 BTRCQ9Y297 605 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 VPS9D1Q9Y2B5 631 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 RPS6KL1Q9Y6S9 549 aa26.79■■□□□ 1.88
ATPAF1-201ENST00000329231 SLC9B1P1A6NJY1 282 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 FANCGO15287 622 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 MAP3K7O43318 606 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 KIAA0754O94854 1291 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 SLCO2B1O94956 709 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 ZNF28P17035 718 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 TUBB4BP68371 445 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 PTK6Q13882 451 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 TUBB2AQ13885 445 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 RNASEH2BQ5TBB1 312 aaKnown RBP26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 OTOAQ7RTW8 1153 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 PCGF5Q86SE9 256 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 TMEM135Q86UB9 458 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 CREG2Q8IUH2 290 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 VRK3Q8IV63 474 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 LPGAT1Q92604 370 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 RUNDC3BQ96NL0 473 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 TUBB2BQ9BVA1 445 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 ACTR10Q9NZ32 417 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 OR6C2Q9NZP2 312 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 LNPEPQ9UIQ6 1025 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 MAD1L1Q9Y6D9 718 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 MGAQ8IWI9 3026 aa26.78■■□□□ 1.88
ATPAF1-201ENST00000329231 PIPSLA2A3N6 862 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 H3BMM5 538 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 FMO4P31512 558 aa26.77■■□□□ 1.88
ATPAF1-201ENST00000329231 ADARP55265 1226 aaKnown RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms