RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PRSS42Q7Z5A4 293 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 SPATS2Q86XZ4 545 aaKnown RBP5.05□□□□□ -1.6
LRIT3-201ENST00000327908 RASGRP3Q8IV61 690 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 PIANPQ8IYJ0 282 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 SFRP1Q8N474 314 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 PDPRQ8NCN5 879 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 CNDP2Q96KP4 475 aaKnown RBP5.05□□□□□ -1.6
LRIT3-201ENST00000327908 BIRC8Q96P09 236 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 TEFMQ96QE5 360 aaKnown RBP5.05□□□□□ -1.6
LRIT3-201ENST00000327908 FERD3LQ96RJ6 166 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 TRIM56Q9BRZ2 755 aaKnown RBP5.05□□□□□ -1.6
LRIT3-201ENST00000327908 SLC29A3Q9BZD2 475 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 WWP1Q9H0M0 922 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 TMBIM4Q9HC24 238 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 MARCH4Q9P2E8 410 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-201ENST00000327908 CPNE7Q9UBL6 633 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 ASF1AQ9Y294 204 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 TSC22D4Q9Y3Q8 395 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 ANGPTL3Q9Y5C1 460 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 R4GN57 208 aa5.05□□□□□ -1.6
LRIT3-201ENST00000327908 CEP350Q5VT06 3117 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TRPM6Q9BX84 2022 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 BLACEA4D250 179 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TARM1B6A8C7 271 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 RFPL3O75679 317 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CHEK2O96017 543 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 WNT1P04628 370 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 MYL2P10916 166 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CEACAM1P13688 526 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 AMD1P17707 334 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 MPP1Q00013 466 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 IL9RQ01113 521 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ACY1Q03154 408 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 GALNT1Q10472 559 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CTBP1Q13363 440 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CFAP157Q5JU67 520 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CNSTQ6PJW8 725 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 RNF165Q6ZSG1 346 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CHST15Q7LFX5 561 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 KANSL1Q7Z3B3 1105 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PIWIL4Q7Z3Z4 852 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 IGDCC3Q8IVU1 814 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 SRFBP1Q8NEF9 429 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 SKA2Q8WVK7 121 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ASB11Q8WXH4 323 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 EFCAB11Q9BUY7 163 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 GTPBP2Q9BX10 602 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 FZD3Q9NPG1 666 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CCDC177Q9NQR7 707 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 INVSQ9Y283 1065 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 MYO18AQ92614 2054 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 SRRM3A6NNA2 597 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 BUD23O43709 281 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 HAUS5O94927 633 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 WDR47O94967 919 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PROS1P07225 676 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 MSL3P1P0C860 447 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ERGP11308 486 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 HSD3B1P14060 373 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 HSD3B2P26439 372 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ACADLP28330 430 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PBLDP30039 288 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 HNF4AP41235 474 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ARL4DP49703 201 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 RAB15P59190 212 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TAS2R39P59534 338 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 NHLH1Q02575 133 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 HHEXQ03014 270 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 FASTKD3Q14CZ7 662 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PLCL1Q15111 1095 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PROX2Q3B8N5 592 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 HHATQ5VTY9 493 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TRMT10BQ6PF06 316 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TRABD2AQ86V40 505 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 LSMEM2Q8N112 164 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 LCN9Q8WX39 176 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ATP6V1G3Q96LB4 118 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 RMDN2Q96LZ7 410 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 QRFPRQ96P65 431 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 AGAP2Q99490 1192 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 EGFL8Q99944 293 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 EFHD1Q9BUP0 239 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 NSRP1Q9H0G5 558 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ABCG4Q9H172 646 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 VPS11Q9H270 941 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 SRMSQ9H3Y6 488 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 SUDS3Q9H7L9 328 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 KCNK4Q9NYG8 393 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 WWOXQ9NZC7 414 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PPT2Q9UMR5 302 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 WBP11Q9Y2W2 641 aaKnown RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TMEM98Q9Y2Y6 226 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 KCNE2Q9Y6J6 123 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CEP192Q8TEP8 1941 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 THADAQ6YHU6 1953 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 EME2A4GXA9 379 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 A6NCN8 305 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TMEM202A6NGA9 273 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TLCD2A6NGC4 264 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 OR2AG2A6NM03 316 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms