RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 NDFIP2Q9NV92 336 aa12.55□□□□□ -0.4
CCDC60-201ENST00000327554 NDRG4Q9ULP0 352 aaKnown RBP12.55□□□□□ -0.4
CCDC60-201ENST00000327554 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
CCDC60-201ENST00000327554 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
CCDC60-201ENST00000327554 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
CCDC60-201ENST00000327554 C19orf81C9J6K1 198 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 DNTTP04053 509 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 EPHA2P29317 976 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 IHHQ14623 411 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 DUSP7Q16829 419 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 SOWAHCQ53LP3 525 aaPredicted RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 YIF1BQ5BJH7 314 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 CARD16Q5EG05 197 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 KDM4DQ6B0I6 523 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 NEK5Q6P3R8 708 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 STAG3L4Q8TBR4 150 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 IPCEF1Q8WWN9 437 aaPredicted RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 NEDD4LQ96PU5 975 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 SH3GL1Q99961 368 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 APOL4Q9BPW4 351 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 TMEM30AQ9NV96 361 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 SLC25A37Q9NYZ2 338 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 RAPGEFL1Q9UHV5 662 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 MKLN1Q9UL63 735 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 GRIP1Q9Y3R0 1128 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 COL4A4P53420 1690 aaPredicted RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 IFRD1O00458 451 aaPredicted RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 SEC22BO75396 215 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 CREG1O75629 220 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 OR4F21O95013 312 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 KRT6AP02538 564 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 KRT6BP04259 564 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 SLC2A3P11169 496 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 WARSP23381 471 aaKnown RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 HOXA9P31269 272 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 LIMK1P53667 647 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 IL1RL1Q01638 556 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 TSNQ15631 228 aaKnown RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 RBBP7Q16576 425 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 ZNF438Q7Z4V0 828 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 NRARPQ7Z6K4 114 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 CCDC190Q86UF4 302 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 TAC4Q86UU9 113 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 DCBLD1Q8N8Z6 715 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 JPH3Q8WXH2 748 aaPredicted RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 MED10Q9BTT4 135 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 C14orf119Q9NWQ9 140 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 TAS2R9Q9NYW1 312 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 ERAP1Q9NZ08 941 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 GALPQ9UBC7 116 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 UBQLN1Q9UMX0 589 aaKnown RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 PEX16Q9Y5Y5 336 aa12.54□□□□□ -0.4
CCDC60-201ENST00000327554 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
CCDC60-201ENST00000327554 ZSCAN5BA6NJL1 495 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 SERPINA1P01009 418 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-201ENST00000327554 GPLD1P80108 840 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TNFAIP1Q13829 316 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 STARD3Q14849 445 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TYSND1Q2T9J0 566 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TBRG1Q3YBR2 411 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 SETMARQ53H47 684 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-201ENST00000327554 ARTNQ5T4W7 220 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 SLC46A3Q7Z3Q1 461 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-201ENST00000327554 CDYL2Q8N8U2 506 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TTC29Q8NA56 475 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-201ENST00000327554 OR10Q1Q8NGQ4 319 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 GRPEL2Q8TAA5 225 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 FCGR1BQ92637 280 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TRIM63Q969Q1 353 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TBATAQ96M53 351 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 OR2A14Q96R47 310 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 SMOQ99835 787 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 SIK2Q9H0K1 926 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 RASSF1Q9NS23 344 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 ASB1Q9Y576 335 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 A0A0G2JMP0 313 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 ASB14A6NK59 587 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 CDC7O00311 574 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 STX16O14662 325 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 LDB2O43679 373 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 MLYCDO95822 493 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 CD4P01730 458 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 IL1RNP18510 177 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 FMO4P31512 558 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 SLC15A1P46059 708 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 TAF6P49848 677 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 HTR6P50406 440 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 GPRIN3Q6ZVF9 776 aa12.53□□□□□ -0.4
CCDC60-201ENST00000327554 CADM2Q8N3J6 435 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms