RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 HHATLQ9HCP6 504 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 GRIN2DO15399 1336 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 HTR3EA5X5Y0 456 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SLITRK3O94933 977 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 CD83Q01151 205 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 ARSKQ6UWY0 536 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 PSKH2Q96QS6 385 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 OPA3Q9H6K4 179 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 TRPV4Q9HBA0 871 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 HLA-DQA2P01906 255 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 VTNP04004 478 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 APLP1P51693 650 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 MFSD10Q14728 455 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 FAM171A1Q5VUB5 890 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 REM2Q8IYK8 340 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-201ENST00000322507 PDCD2LQ9BRP1 358 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 FNDC11Q9BVV2 318 aa9.59□□□□□ -0.87
COL12A1-201ENST00000322507 SRPRAP08240 638 aaKnown RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ACVR2BQ13705 512 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TRAPPC5Q8IUR0 188 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 BORCS7Q96B45 105 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 OMDQ99983 421 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 OTOFQ9HC10 1997 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ABCA11PQ4W5N1 156 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 OR4C5Q8NGB2 326 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TNKS2Q9H2K2 1166 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 GPRC5CQ9NQ84 441 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 FADS1O60427 444 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TRUB2O95900 331 aaKnown RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 GPIP06744 558 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 EXOC3L2Q2M3D2 409 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 HSDL1Q3SXM5 330 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TRIM61Q5EBN2 209 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 PGM2L1Q6PCE3 622 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 SLC44A3Q8N4M1 653 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 PGAP3Q96FM1 320 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 KLRC2P26717 231 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 FKBP1BP68106 108 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 RNF4P78317 190 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TAPT1Q6NXT6 567 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 PSMD13Q9UNM6 376 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 RP1P56715 2156 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 FGBP02675 491 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 GALNT1Q10472 559 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 GFOD2Q3B7J2 385 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 FNBP1LQ5T0N5 605 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ADGRD2Q7Z7M1 963 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ZNF420Q8TAQ5 688 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 XPNPEP1Q9NQW7 623 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 MCIDASD6RGH6 385 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 FKTNO75072 461 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 LATS1O95835 1130 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ZNF829Q3KNS6 432 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 AVL9Q8NBF6 648 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 A0A0J9YVX5 310 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 GLDCP23378 1020 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 CDC25CP30307 473 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TAS2R41P59536 307 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 PPP2R2BQ00005 443 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 MOGQ16653 247 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 CTC1Q2NKJ3 1217 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TMEM41BQ5BJD5 291 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 PTCHD1Q96NR3 888 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 CALML5Q9NZT1 146 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 SAMHD1Q9Y3Z3 626 aaKnown RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 RPS17P08708 135 aaKnown RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 CCNYL3P0C7X3 344 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ARP10275 920 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 HGFP14210 728 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 DPY19L1Q2PZI1 675 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 USP41Q3LFD5 358 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 RNASEH2BQ5TBB1 312 aaKnown RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 RNF220Q5VTB9 566 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 PAOXQ6QHF9 649 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 C15orf52Q6ZUT6 534 aaKnown RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 CXorf40AQ8TE69 158 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 OTUB2Q96DC9 234 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 SULT4A1Q9BR01 284 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 SPAG17Q6Q759 2223 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 OR6C65A6NJZ3 312 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 KIAA1324LA8MWY0 1029 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 COQ9O75208 318 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 TSPAN5P62079 268 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 IKBKEQ14164 716 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 SLC37A3Q8NCC5 494 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 ACOT11Q8WXI4 607 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-201ENST00000322507 CAPN10Q9HC96 672 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 MYOM1P52179 1685 aa9.58□□□□□ -0.88
COL12A1-201ENST00000322507 PAPSS1O43252 624 aaPredicted RBP9.57□□□□□ -0.88
COL12A1-201ENST00000322507 DIRAS1O95057 198 aa9.57□□□□□ -0.88
COL12A1-201ENST00000322507 NR2F1P10589 423 aa9.57□□□□□ -0.88
COL12A1-201ENST00000322507 MAPK10P53779 464 aa9.57□□□□□ -0.88
COL12A1-201ENST00000322507 PRR5P85299 388 aa9.57□□□□□ -0.88
COL12A1-201ENST00000322507 AP5B1Q2VPB7 878 aa9.57□□□□□ -0.88
COL12A1-201ENST00000322507 VSTM1Q6UX27 236 aa9.57□□□□□ -0.88
COL12A1-201ENST00000322507 CPNE2Q96FN4 548 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms