RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PYHIN1Q6K0P9 492 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SLC25A24Q6NUK1 477 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GPR153Q6NV75 609 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CIR1Q86X95 450 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 IFNLR1Q8IU57 520 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 DCP1BQ8IZD4 617 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ACOT12Q8WYK0 555 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CELF6Q96J87 481 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ALPK1Q96QP1 1244 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 VWA7Q9Y334 891 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PAPPAQ13219 1627 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TISP43B9A030 160 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ATP6V1G2-DDX39BF2Z307 99 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 YKT6O15498 198 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PRMT3O60678 531 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 XYLBO75191 536 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 LRATO95237 230 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 IL7RP16871 459 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 IDNKQ5T6J7 187 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 EIF5AL1Q6IS14 154 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ARSKQ6UWY0 536 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TRPV3Q8NET8 790 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 OR8K5Q8NH50 307 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ELMO3Q96BJ8 720 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 FBXO44Q9H4M3 255 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SMURF1Q9HCE7 757 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHGB6Q9Y5F9 930 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHA2Q9Y5H9 948 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PAPSS2O95340 614 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 OR1E1P30953 314 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CAPZA2P47755 286 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ABRQ12979 859 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM44Q2T9K0 475 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SEZ6Q53EL9 994 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ADCK2Q7Z695 626 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 C10orf53Q8N6V4 93 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 HEXDCQ8WVB3 486 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GTF2H4Q92759 462 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 KLHL5Q96PQ7 755 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GON7Q9BXV9 100 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 DNAJC5Q9H3Z4 198 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 AAASQ9NRG9 546 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 HSPE1-MOB4S4R3N1 261 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CACNA1BQ00975 2339 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ZSWIM8A7E2V4 1837 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ITGA3P26006 1051 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SLC11A2P49281 568 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ATP4BP51164 291 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 DNAJB13P59910 316 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PPP3R1P63098 170 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 MRPS5P82675 430 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 MPP2Q14168 576 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ATAD3CQ5T2N8 411 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 FAM198BQ6UWH4 519 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CARM1Q86X55 608 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 MASTLQ96GX5 879 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 FGFBP2Q9BYJ0 223 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 VRTNQ9H8Y1 702 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 M0R036 132 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 DHX15O43143 795 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CLVS2Q5SYC1 327 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM236Q5W0B7 351 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM198Q66K66 360 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CHSY3Q70JA7 882 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 APOBEC3FQ8IUX4 373 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 C11orf65Q8NCR3 313 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF548Q8NEK5 533 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 DENND1AQ8TEH3 1009 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF597Q96LX8 424 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF641Q96N77 438 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM134Q9H6X4 195 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SPACA6W5XKT8 324 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 WRBO00258 174 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TRIM3O75382 744 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SERPINA3P01011 423 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 HOXD13P35453 343 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 MAPK9P45984 424 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GBE1Q04446 702 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 HEPACAMQ14CZ8 416 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PLA2G4EQ3MJ16 856 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 DCPSQ96C86 337 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 OR52B2Q96RD2 323 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GATA5Q9BWX5 397 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 AGPAT4Q9NRZ5 378 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ZNRF3Q9ULT6 936 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 IRS2Q9Y4H2 1338 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PPEF2O14830 753 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 MRPS14O60783 128 aaKnown RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 USP17L7P0C7H9 530 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 CD6P30203 668 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 FAM76BQ5HYJ3 339 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 MFSD2AQ8NA29 543 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 LINGO1Q96FE5 620 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 HSFY1Q96LI6 401 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SERPINB11Q96P15 392 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 COL21A1Q96P44 957 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TMEM209Q96SK2 561 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms