RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 HUNKP57058 714 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 GTF2H3Q13889 308 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 SYT16Q17RD7 645 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 SYTL1Q8IYJ3 562 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 SLC22A15Q8IZD6 547 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 C3orf58Q8NDZ4 430 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 LPPQ93052 612 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 TRIM62Q9BVG3 475 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 DCAF13Q9NV06 445 aaKnown RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 TSR3Q9UJK0 312 aaKnown RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ARVCFO00192 962 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 ANKRD28O15084 1053 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 CNPP09543 421 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 GGT5P36269 586 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 CLK3P49761 638 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 RPL38P63173 70 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 DPP9Q86TI2 863 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 GTF2H4Q92759 462 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 ZNF382Q96SR6 550 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 BARD1Q99728 777 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 MMP27Q9H306 513 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 RASSF1Q9NS23 344 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 OPTCQ9UBM4 332 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 LTBP3Q9NS15 1303 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 AGAP5A6NIR3 686 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 MYO1GB0I1T2 1018 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 SMIM10L2AP0DMW4 78 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 SMIM10L2BP0DMW5 78 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 ALOX12P18054 663 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 GJA5P36382 358 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 PTPRNQ16849 979 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 CES5AQ6NT32 575 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 NKAPQ8N5F7 415 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 SIDT2Q8NBJ9 832 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 NETO1Q8TDF5 533 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 ATL1Q8WXF7 558 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 CDKN2AIPNLQ96HQ2 116 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 ANKHQ9HCJ1 492 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 VNN3Q9NY84 501 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 TREHO43280 583 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 CCNKO75909 580 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 PGLSO95336 258 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 KRT8P05787 483 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 DBTP11182 482 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 SCNN1GP51170 649 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 MLLT6P55198 1093 aaPredicted RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 GBX1Q14549 363 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 GTDC1Q4AE62 458 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 PIK3R6Q5UE93 754 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 MSANTD2Q6P1R3 559 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 AHSA2Q719I0 299 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 BRSK1Q8TDC3 778 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 EEF1AKMT1Q8WVE0 214 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 PYCR2Q96C36 320 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 APOL4Q9BPW4 351 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 SARS2Q9NP81 518 aaKnown RBP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 PRDM8Q9NQV8 689 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 SLC25A37Q9NYZ2 338 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 ZMYM5Q9UJ78 669 aa17.55■□□□□ 0.4
PRKCB-202ENST00000321728 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.55■□□□□ 0.4
PRKCB-202ENST00000321728 TAF4O00268 1085 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 AIREO43918 545 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 KLK8O60259 260 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 HOXD8P13378 290 aaPredicted RBP17.54■□□□□ 0.4
PRKCB-202ENST00000321728 ITGB6P18564 788 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 MVKQ03426 396 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 CACNB2Q08289 660 aaPredicted RBP17.54■□□□□ 0.4
PRKCB-202ENST00000321728 ABRAXAS2Q15018 415 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 TYSND1Q2T9J0 566 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 UMODL1-AS1Q8N2C9 162 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 LILRB4Q8NHJ6 448 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 LINGO1Q96FE5 620 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 SH3GL1Q99961 368 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 NACA2Q9H009 215 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 MARCH7Q9H992 704 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 ZNF408Q9H9D4 720 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 FNDC3AQ9Y2H6 1198 aaKnown RBP17.54■□□□□ 0.4
PRKCB-202ENST00000321728 PPP2R3BQ9Y5P8 575 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 COMMD10Q9Y6G5 202 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 CASTOR2A6NHX0 329 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 IDH3BO43837 385 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 PTTG1O95997 202 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 FGF1P05230 155 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 TGFBR2P37173 567 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 NEK2P51955 445 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 ALFQ53S48 1182 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 CCBE1Q6UXH8 406 aaPredicted RBP17.54■□□□□ 0.4
PRKCB-202ENST00000321728 GPR149Q86SP6 731 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 MYOCQ99972 504 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 CLSTN3Q9BQT9 956 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 CCNB1IP1Q9NPC3 277 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 TMLHEQ9NVH6 421 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 TRMT6Q9UJA5 497 aaKnown RBP17.54■□□□□ 0.4
PRKCB-202ENST00000321728 UGT2A1Q9Y4X1 527 aa17.54■□□□□ 0.4
PRKCB-202ENST00000321728 CLDN24A6NM45 220 aa17.53■□□□□ 0.4
PRKCB-202ENST00000321728 TPD52L2O43399 206 aaKnown RBP17.53■□□□□ 0.4
PRKCB-202ENST00000321728 NIPSNAP2O75323 286 aa17.53■□□□□ 0.4
PRKCB-202ENST00000321728 RETP07949 1114 aa17.53■□□□□ 0.4
PRKCB-202ENST00000321728 HLA-DPA1P20036 260 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms