RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GFAPP14136 432 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 CBSP35520 551 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 WDR4P57081 412 aaKnown RBP15.02■□□□□ -0
PDLIM5-202ENST00000318007 ATP6V0D1P61421 351 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 GUCY1A3Q02108 690 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 ILF2Q12905 390 aaKnown RBP15.02■□□□□ -0
PDLIM5-202ENST00000318007 TGFBIQ15582 683 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 HHATQ5VTY9 493 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 PRR23CQ6ZRP0 262 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 GPSM1Q86YR5 675 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 C10orf107Q8IVU9 208 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 TMEM151AQ8N4L1 468 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 GPBAR1Q8TDU6 330 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 KIAA1191Q96A73 305 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 ARL15Q9NXU5 204 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 PDE10AQ9Y233 779 aa15.02■□□□□ -0
PDLIM5-202ENST00000318007 ARHGEF17Q96PE2 2063 aaPredicted RBP15.02■□□□□ -0
PDLIM5-202ENST00000318007 PIAS2O75928 621 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 ZWINTO95229 277 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 COL6A2P12110 1019 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 MAP4P27816 1152 aaKnown RBP15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 HALP42357 657 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 RPIAP49247 311 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 ARRB1P49407 418 aaPredicted RBP15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 DMPKQ09013 629 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 ELOCQ15369 112 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 SF3A2Q15428 464 aaKnown RBP15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 PPP1R3AQ16821 1122 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 STAG3L4Q8TBR4 150 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 ASB11Q8WXH4 323 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 PYCR2Q96C36 320 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 IL17FQ96PD4 163 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 ATOH8Q96SQ7 321 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 MRPL57Q9BQC6 102 aaKnown RBP15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 ACSL5Q9ULC5 683 aa15.02□□□□□ -0.01
PDLIM5-202ENST00000318007 PABPN1LA6NDY0 278 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 KERAO60938 352 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 SIX3O95343 332 aaPredicted RBP15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 MATN4O95460 622 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 C1orf105O95561 183 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 GSTA1P08263 222 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 GSTM1P09488 218 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 F3P13726 295 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 ENGP17813 658 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 ACADLP28330 430 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 SLC26A3P40879 764 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 AGTR2P50052 363 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 GSTM4Q03013 218 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 PCLAFQ15004 111 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 SHBQ15464 509 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 UAP1L1Q3KQV9 507 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 CCDC153Q494R4 210 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 FAM219BQ5XKK7 198 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 ADAMTSL2Q86TH1 951 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 NAGSQ8N159 534 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 NUSAP1Q9BXS6 441 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 ATG10Q9H0Y0 220 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 TFB2MQ9H5Q4 396 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 XKR8Q9H6D3 395 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 CAPN10Q9HC96 672 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 INTS9Q9NV88 658 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 COPG2Q9UBF2 871 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 SPASTQ9UBP0 616 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 CFAP54Q96N23 3096 aa15.01□□□□□ -0.01
PDLIM5-202ENST00000318007 G3V2L1 256 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 TM9SF1O15321 606 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 EPN2O95208 641 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 RBP1P09455 135 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 MYL2P10916 166 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 CPA3P15088 417 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 TSPAN8P19075 237 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 GDF5P43026 501 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 ETV4P43268 484 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 KPNA2P52292 529 aaKnown RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 ATXN3P54252 364 aaPredicted RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 MAZP56270 477 aaKnown RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 SPEM2Q0P670 501 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 RPE65Q16518 533 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 PEAR1Q5VY43 1037 aaPredicted RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 SLC25A45Q8N413 288 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 ZDHHC1Q8WTX9 485 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 PDLIM5Q96HC4 596 aaKnown RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 SSU72Q9NP77 194 aaKnown RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 RXFP3Q9NSD7 469 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 MKS1Q9NXB0 559 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 ZNF624Q9P2J8 865 aaPredicted RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 SLC6A14Q9UN76 642 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 ASB1Q9Y576 335 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 CABIN1Q9Y6J0 2220 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 LNP1A1A4G5 178 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 PRR19A6NJB7 356 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 ARHGAP33O14559 1287 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 DLX3O60479 287 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 PSIP1O75475 530 aaKnown RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 HIST1H2AGP0C0S8 130 aaPredicted RBP15□□□□□ -0.01
PDLIM5-202ENST00000318007 MPC1LP0DKB6 136 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 MTHFD2P13995 350 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 HIST1H2ADP20671 130 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 CYP2A7P20853 494 aa15□□□□□ -0.01
PDLIM5-202ENST00000318007 ALDH3A1P30838 453 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms