RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GSTA5Q7RTV2 222 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 TBC1D21Q8IYX1 336 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 PPHLN1Q8NEY8 458 aaKnown RBP17.23■□□□□ 0.35
TPM1-203ENST00000317516 CPT1BQ92523 772 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 SGSM3Q96HU1 749 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 LRFN5Q96NI6 719 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 HGH1Q9BTY7 390 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 TLR10Q9BXR5 811 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 TCAF1Q9Y4C2 921 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 KCNMB2Q9Y691 235 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 PRSS21Q9Y6M0 314 aa17.23■□□□□ 0.35
TPM1-203ENST00000317516 TLN1Q9Y490 2541 aaKnown RBP17.22■□□□□ 0.35
TPM1-203ENST00000317516 CDC14CA4D256 554 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 MKRN2OSH3BPM6 223 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 ZIC2O95409 532 aaPredicted RBP17.22■□□□□ 0.35
TPM1-203ENST00000317516 MSL3P1P0C860 447 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 ETS1P14921 441 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 PTPN4P29074 926 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 GRIA1P42261 906 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 CSRP3P50461 194 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 ACVR1Q04771 509 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 BRD3Q15059 726 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 PCID2Q5JVF3 399 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 PTRH1Q86Y79 214 aaKnown RBP17.22■□□□□ 0.35
TPM1-203ENST00000317516 TRIM58Q8NG06 486 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 THAP4Q8WY91 577 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 MR1Q95460 341 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 ABHD17AQ96GS6 310 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 PPM1MQ96MI6 270 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 PITPNM3Q9BZ71 974 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 SLC7A5P2Q9GIP4 190 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 ACTL8Q9H568 366 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 CLMPQ9H6B4 373 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 XKR8Q9H6D3 395 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 HOMER3Q9NSC5 361 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 ACTR10Q9NZ32 417 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 SLC2A6Q9UGQ3 507 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 ANAPC2Q9UJX6 822 aa17.22■□□□□ 0.35
TPM1-203ENST00000317516 FARSAQ9Y285 508 aaKnown RBP17.22■□□□□ 0.35
TPM1-203ENST00000317516 SLC5A10A0PJK1 596 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 ACADLP28330 430 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 RPL22P35268 128 aaKnown RBP17.21■□□□□ 0.35
TPM1-203ENST00000317516 FAM199XQ6PEV8 388 aaPredicted RBP17.21■□□□□ 0.35
TPM1-203ENST00000317516 MICALCLQ6ZW33 695 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 SYVN1Q86TM6 617 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 PRUNE1Q86TP1 453 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 ADGRF3Q8IZF5 1079 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 OR5AR1Q8NGP9 310 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 N4BP2L2Q92802 583 aaPredicted RBP17.21■□□□□ 0.35
TPM1-203ENST00000317516 CLIP3Q96DZ5 547 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 TRAPPC9Q96Q05 1148 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 ZNF71Q9NQZ8 489 aaPredicted RBP17.21■□□□□ 0.35
TPM1-203ENST00000317516 EIF2B3Q9NR50 452 aaKnown RBP17.21■□□□□ 0.35
TPM1-203ENST00000317516 OR6C2Q9NZP2 312 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 BFARQ9NZS9 450 aa17.21■□□□□ 0.35
TPM1-203ENST00000317516 TMEM150CB9EJG8 249 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 MEN1O00255 615 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 OR1I1O60431 355 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 FGGP02679 453 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 RPN2P04844 631 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 HBQ1P09105 142 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 ZSCAN5DPP0CG00 497 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 ST6GAL1P15907 406 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 CYP2A7P20853 494 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 NPY2RP49146 381 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 TTPAP49638 278 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 BASP1P80723 227 aaKnown RBP17.2■□□□□ 0.34
TPM1-203ENST00000317516 LACTB2Q53H82 288 aaPredicted RBP17.2■□□□□ 0.34
TPM1-203ENST00000317516 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
TPM1-203ENST00000317516 IZUMO3Q5VZ72 239 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 SPESP1Q6UW49 350 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 UNC5AQ6ZN44 842 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 GPR135Q8IZ08 494 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 OR5K2Q8NHB8 316 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 ASZ1Q8WWH4 475 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 TCTN2Q96GX1 697 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 ZNF778Q96MU6 729 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 IL22Q9GZX6 179 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 AKIRIN1Q9H9L7 192 aaPredicted RBP17.2■□□□□ 0.34
TPM1-203ENST00000317516 CHRAC1Q9NRG0 131 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 ICKQ9UPZ9 632 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 MAN2B2Q9Y2E5 1009 aa17.2■□□□□ 0.34
TPM1-203ENST00000317516 TDRKHQ9Y2W6 561 aaKnown RBP17.2■□□□□ 0.34
TPM1-203ENST00000317516 ZNF106Q9H2Y7 1883 aaKnown RBP17.19■□□□□ 0.34
TPM1-203ENST00000317516 BHMG1C9JSJ3 638 aaPredicted RBP17.19■□□□□ 0.34
TPM1-203ENST00000317516 E7EQ34 232 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 CEP104O60308 925 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 RFPL1O75677 317 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 APOA4P06727 396 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 FURINP09958 794 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 ITGA1P56199 1179 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 SESN2P58004 480 aaPredicted RBP17.19■□□□□ 0.34
TPM1-203ENST00000317516 CDK16Q00536 496 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 HSPA14Q0VDF9 509 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 GPS2Q13227 327 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 SIX1Q15475 284 aaPredicted RBP17.19■□□□□ 0.34
TPM1-203ENST00000317516 UGT8Q16880 541 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 PLEKHS1Q5SXH7 462 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 ZNF517Q6ZMY9 492 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms