RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 G3V2L1 256 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 H0Y626 953 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 H3BQ06 376 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 KCNN4O15554 427 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 NRP2O60462 931 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 MRPS14O60783 128 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TSC22D2O75157 780 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CCNDBP1O95273 360 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CYP11A1P05108 521 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 HEXBP07686 556 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 HBQ1P09105 142 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CSH1P0DML2 217 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CSH2P0DML3 217 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DARSP14868 501 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ITGB6P18564 788 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TNNI1P19237 187 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 HK1P19367 917 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 HOXA6P31267 233 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SLC15A1P46059 708 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RPS9P46781 194 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CLCN4P51793 760 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PER3P56645 1201 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RPL10AP62906 217 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DUSP4Q13115 394 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ADAM15Q13444 863 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TAB1Q15750 504 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SLC9B1Q4ZJI4 515 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 GNASQ5JWF2 1037 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TBCELQ5QJ74 424 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 KIAA1614Q5VZ46 1190 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DENND5AQ6IQ26 1287 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PRMT9Q6P2P2 845 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SLC37A3Q8NCC5 494 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 FAM110BQ8TC76 370 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CANT1Q8WVQ1 401 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SLC5A11Q8WWX8 675 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RPL3LQ92901 407 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RAB7BQ96AH8 199 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CPXM1Q96SM3 734 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 GPR22Q99680 433 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 NMUR1Q9HB89 426 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 POPDC3Q9HBV1 291 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 AGPAT4Q9NRZ5 378 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TRMT13Q9NUP7 481 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 OXSMQ9NWU1 459 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DPP3Q9NY33 737 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 BFARQ9NZS9 450 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM181Q9P2C4 612 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ABCD2Q9UBJ2 740 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TBC1D24Q9ULP9 559 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ERVK-19Q9WJR5 959 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 MOXD2PA6NHM9 499 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 LOC110117498-PIK3R3F6TDL0 507 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DFNA5O60443 496 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 EIF1BO60739 113 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CCNYL3P0C7X3 344 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RNF224P0DH78 156 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RRASP10301 218 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PCMT1P22061 227 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SHMT2P34897 504 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 HNF4AP41235 474 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 EIF1P41567 113 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PSME3P61289 254 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CSNK2BP67870 215 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RBP5P82980 135 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TRAF3Q13114 568 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 GRB7Q14451 532 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 POU4F3Q15319 338 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DOK7Q18PE1 504 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 TEX261Q6UWH6 196 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SUSD1Q6UWL2 747 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ALKAL1Q6UXT8 129 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 FAM35AQ86V20 835 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PIGZQ86VD9 579 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 KRT73Q86Y46 540 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DDIASQ8IXT1 998 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PCDH19Q8TAB3 1148 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 JOSD2Q8TAC2 188 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SLC22A17Q8WUG5 538 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ROPN1LQ96C74 230 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 YIPF6Q96EC8 236 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CCDC126Q96EE4 140 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CENPNQ96H22 339 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 RDH12Q96NR8 316 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 DCLRE1CQ96SD1 692 aaKnown RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ELOVL6Q9H5J4 265 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 SETD4Q9NVD3 440 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 MKLN1Q9UL63 735 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PLCL2Q9UPR0 1127 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 AGTPBP1Q9UPW5 1226 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 BAIAP2Q9UQB8 552 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 U3KQ87 197 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 A0A1B0GVM2 712 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 E2F8A0AVK6 867 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 CCDC154A6NI56 674 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ABCD4O14678 606 aa6.53□□□□□ -1.36
ZNF540-201ENST00000316433 ZBTB24O43167 697 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-201ENST00000316433 HUS1O60921 280 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms