RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 SYTL3Q4VX76 610 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 RNF187Q5TA31 235 aaPredicted RBP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 PTRHD1Q6GMV3 140 aaKnown RBP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 TMEM26Q6ZUK4 368 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 ZNF572Q7Z3I7 529 aaPredicted RBP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 TMEM135Q86UB9 458 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 AGGF1Q8N302 714 aaeCLIP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 LILRA3Q8N6C8 439 aaPredicted RBP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 KIF18AQ8NI77 898 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 ERP44Q9BS26 406 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 TBC1D10AQ9BXI6 508 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 RAB17Q9H0T7 212 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 C20orf96Q9NUD7 363 aaPredicted RBP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 IL1RAPL1Q9NZN1 696 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 GNPTGQ9UJJ9 305 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 UTP11Q9Y3A2 253 aaKnown RBP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 CFAP20Q9Y6A4 193 aaKnown RBP11.82□□□□□ -0.52
ABCD3-201ENST00000315713 MED13Q9UHV7 2174 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
ABCD3-201ENST00000315713 SHANK1Q9Y566 2161 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 ZCWPW2A0A1B0GU75 182 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 LILRA5A6NI73 299 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 IFRD1O00458 451 aaPredicted RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 LIN7AO14910 233 aaPredicted RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 PRKAR1AP10644 381 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 MTHFD1P11586 935 aaKnown RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 OGNP20774 298 aaKnown RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 PREPP48147 710 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 ARCN1P48444 511 aaKnown RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 EPHA4P54764 986 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 EIF3BP55884 814 aaKnown RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 BRD3Q15059 726 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 PLCL1Q15111 1095 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 CLPPQ16740 277 aaPredicted RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 MSS51Q4VC12 460 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 HP1BP3Q5SSJ5 553 aaPredicted RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 ZNF470Q6ECI4 717 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 NEPROQ6NW34 567 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 C8orf74Q6P047 294 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 FAM129CQ86XR2 697 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 RBM12BQ8IXT5 1001 aaKnown RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 CACNA2D3Q8IZS8 1091 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 AGBL5Q8NDL9 886 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 OR4D9Q8NGE8 314 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 GPR150Q8NGU9 434 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 RMDN2Q96LZ7 410 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 PWWP2AQ96N64 755 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 PANX3Q96QZ0 392 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 INSM2Q96T92 566 aaPredicted RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 EBNA1BP2Q99848 306 aaKnown RBP11.81□□□□□ -0.52
ABCD3-201ENST00000315713 NAT9Q9BTE0 207 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 DDA1Q9BW61 102 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 UCK1Q9HA47 277 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 OCIAD1Q9NX40 245 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 SLC39A1Q9NY26 324 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 WHRNQ9P202 907 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 CHMP2BQ9UQN3 213 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 PCDHGA3Q9Y5H0 932 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 FAM169AQ9Y6X4 670 aa11.81□□□□□ -0.52
ABCD3-201ENST00000315713 EFCAB7A8K855 629 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 IQCF5A8MTL0 148 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 RAD1O60671 282 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 TTC4O95801 387 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 AMD1P17707 334 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 RPS3P23396 243 aaKnown RBP eCLIP11.8□□□□□ -0.52
ABCD3-201ENST00000315713 ELK3P41970 407 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 CCR10P46092 362 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 CSE1LP55060 971 aaKnown RBP11.8□□□□□ -0.52
ABCD3-201ENST00000315713 RPA4Q13156 261 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 TRA2AQ13595 282 aaKnown RBP eCLIP11.8□□□□□ -0.52
ABCD3-201ENST00000315713 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 GPR18Q14330 331 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 CRYMQ14894 314 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 IGFBP7Q16270 282 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 TYSND1Q2T9J0 566 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 SPANXN3Q5MJ09 141 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 ANKS6Q68DC2 871 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 DUS1LQ6P1R4 473 aaKnown RBP11.8□□□□□ -0.52
ABCD3-201ENST00000315713 NAPRTQ6XQN6 538 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 KCNMB4Q86W47 210 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 LRRC6Q86X45 466 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 CILP2Q8IUL8 1156 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 KRT222Q8N1A0 295 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 MNS1Q8NEH6 495 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 GABPB2Q8TAK5 448 aaPredicted RBP11.8□□□□□ -0.52
ABCD3-201ENST00000315713 CALML6Q8TD86 181 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 NCSTNQ92542 709 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 CFAP36Q96G28 342 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 TCF12Q99081 682 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 DPYSL5Q9BPU6 564 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 FAM167BQ9BTA0 163 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 TUBB2BQ9BVA1 445 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 EPB41L1Q9H4G0 881 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 SLC40A1Q9NP59 571 aa11.8□□□□□ -0.52
ABCD3-201ENST00000315713 ZC3H7BQ9UGR2 993 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms