RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 CKMT2P17540 419 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 GTF2E2P29084 291 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 GRK4P32298 578 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CHRNA4P43681 627 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 PUDPQ08623 228 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CDC20Q12834 499 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 MGAT5BQ3V5L5 792 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 NOMO2Q5JPE7 1267 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 KIAA1841Q6NSI8 718 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ZC3HC1Q86WB0 502 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CEP97Q8IW35 865 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TNS4Q8IZW8 715 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 MAPK15Q8TD08 544 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ZNF669Q96BR6 464 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 NAT9Q9BTE0 207 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 C9orf16Q9BUW7 83 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SYNDIG1Q9H7V2 258 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 LRRC40Q9H9A6 602 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TBC1D13Q9NVG8 400 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 MPP6Q9NZW5 540 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SCML2Q9UQR0 700 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ERI2A8K979 691 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 E9PAM4 449 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 NDST3O95803 873 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SLC35E2BP0CK96 405 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ALOX12P18054 663 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 HLA-FP30511 346 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CCR10P46092 362 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 GATMP50440 423 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 DSG2Q14126 1118 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 POLD3Q15054 466 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SLC39A12Q504Y0 691 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TMEM65Q6PI78 240 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CRTC3Q6UUV7 619 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 RANBP10Q6VN20 620 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ZNF354CQ86Y25 554 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 PNPLA1Q8N8W4 532 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CA5BP1Q8WTZ4 195 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 VWCEQ96DN2 955 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 GPR22Q99680 433 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ADAM28Q9UKQ2 775 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 COPS3Q9UNS2 423 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CCDC182A6NF36 153 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 E5RI56 91 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 WWP2O00308 870 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TFECO14948 347 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 MATN3O15232 486 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 NBNO60934 754 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 GLRA3O75311 464 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SOAT2O75908 522 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 CNTN5O94779 1100 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 AHSGP02765 367 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 XRCC1P18887 633 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 POU3F3P20264 500 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 IDH3AP50213 366 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TIAL1Q01085 375 aaKnown RBP eCLIP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TRAP1Q12931 704 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 GRM3Q14832 879 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TYSND1Q2T9J0 566 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 MTX3Q5HYI7 312 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 BRMS1LQ5PSV4 323 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 AGAP6Q5VW22 663 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TMEM236Q5W0B7 351 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ZNF544Q6NX49 715 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 LIPIQ6XZB0 460 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ZBTB49Q6ZSB9 765 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 BEND4Q6ZU67 534 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SNX20Q7Z614 316 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TMEM173Q86WV6 379 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 DSELQ8IZU8 1212 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 S100ZQ8WXG8 99 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SEPT8Q92599 483 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 AGAP4Q96P64 663 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 BDH2Q9BUT1 245 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SORBS1Q9BX66 1292 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ZNF385DQ9H6B1 395 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SUCOQ9UBS9 1254 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 RIMS3Q9UJD0 308 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 TINAGQ9UJW2 476 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SCML1Q9UN30 329 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 HRH3Q9Y5N1 445 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SNX5Q9Y5X3 404 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SLC22A7Q9Y694 548 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 AXIN1O15169 862 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 AOC2O75106 756 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 YES1P07947 543 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 RBP1P09455 135 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 HAPLN1P10915 354 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 SRCP12931 536 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 CSKP41240 450 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 SLC1A6P48664 564 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 SREBF2Q12772 1141 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 SELPLGQ14242 412 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 DDR2Q16832 855 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 ZNF789Q5FWF6 425 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 VWA5B1Q5TIE3 1220 aa9.35□□□□□ -0.91
RBFOX1-201ENST00000311745 NADSYN1Q6IA69 706 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms