RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 CDH18Q13634 790 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 R3HCC1LQ7Z5L2 792 aaKnown RBP24.82■■□□□ 1.56
HOXB3-201ENST00000311626 ZC3H7AQ8IWR0 971 aaKnown RBP24.82■■□□□ 1.56
HOXB3-201ENST00000311626 GFM2Q969S9 779 aaKnown RBP24.82■■□□□ 1.56
HOXB3-201ENST00000311626 SLC47A1Q96FL8 570 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 PPP3R2Q96LZ3 170 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 CD244Q9BZW8 370 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 PCDHB1Q9Y5F3 818 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 RGS14O43566 566 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 PGRP06401 933 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 DCKP27707 260 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 PHC1P78364 1004 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 LAPTM4AQ15012 233 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 ZSWIM9Q86XI8 627 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 ZDHHC13Q8IUH4 622 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 NPAS4Q8IUM7 802 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 ARL14EPQ8N8R7 260 aaPredicted RBP24.82■■□□□ 1.56
HOXB3-201ENST00000311626 MIPOL1Q8TD10 442 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 FRS2Q8WU20 508 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 TANKQ92844 425 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 ULK4Q96C45 1275 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 RHBDF1Q96CC6 855 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 OR52E6Q96RD3 313 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 AMBRA1Q9C0C7 1298 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 MAGEE1Q9HCI5 957 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 HPS4Q9NQG7 708 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 OARD1Q9Y530 152 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 PCDHGA8Q9Y5G5 932 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.82■■□□□ 1.56
HOXB3-201ENST00000311626 UPK3BL1B0FP48 263 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 UPK3BL2E5RIL1 263 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 LRATO95237 230 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 GLUD1P00367 558 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 AGXTP21549 392 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 TPD52P55327 224 aaPredicted RBP24.82■■□□□ 1.56
HOXB3-201ENST00000311626 MTA1Q13330 715 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 LRRC73Q5JTD7 316 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 TXNDC8Q6A555 127 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 ZBTB2Q8N680 514 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 AUTS2Q8WXX7 1259 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 ACTR8Q9H981 624 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 LRTM1Q9HBL6 345 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 PCDH10Q9P2E7 1040 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 GNPTGQ9UJJ9 305 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 INVSQ9Y283 1065 aa24.82■■□□□ 1.56
HOXB3-201ENST00000311626 THSD7BQ9C0I4 1608 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 MYCLP1P12525 358 aaPredicted RBP24.81■■□□□ 1.56
HOXB3-201ENST00000311626 AKT1P31749 480 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 RGS4P49798 205 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 SMARCB1Q12824 385 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 ELAVL2Q12926 359 aaKnown RBP24.81■■□□□ 1.56
HOXB3-201ENST00000311626 SLC8B1Q6J4K2 584 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 NECAB2Q7Z6G3 386 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 RNF175Q8N4F7 328 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 C2orf15Q8WU43 125 aaKnown RBP24.81■■□□□ 1.56
HOXB3-201ENST00000311626 SNX19Q92543 992 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 MBOAT4Q96T53 435 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 INPP5KQ9BT40 448 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 AASSQ9UDR5 926 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 DLGAP4Q9Y2H0 992 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 OR51B4Q9Y5P0 310 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 CXCR6O00574 342 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 TULP3O75386 442 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 GNPDA1P46926 289 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 DHRS4L2Q6PKH6 230 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 RBFAQ8N0V3 343 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 LHPPQ9H008 270 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 PLGRKTQ9HBL7 147 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 C8orf4Q9NR00 106 aa24.81■■□□□ 1.56
HOXB3-201ENST00000311626 MBD1Q9UIS9 605 aaPredicted RBP24.81■■□□□ 1.56
HOXB3-201ENST00000311626 H0YAE9 185 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 MANBAO00462 879 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 CTU2Q2VPK5 515 aaKnown RBP24.8■■□□□ 1.56
HOXB3-201ENST00000311626 OR8J3Q8NGG0 315 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 TBC1D15Q8TC07 691 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 NETO1Q8TDF5 533 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 FAM118AQ9NWS6 357 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 MTRRQ9UBK8 725 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 PCDHB14Q9Y5E9 798 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 DGKAP23743 735 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 ZNF773Q6PK81 442 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 RBM23Q86U06 439 aaKnown RBP24.8■■□□□ 1.56
HOXB3-201ENST00000311626 PYCR2Q96C36 320 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 TSSK3Q96PN8 268 aa24.8■■□□□ 1.56
HOXB3-201ENST00000311626 ELOVL7A1L3X0 281 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 HS6ST1O60243 411 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 MAN1A2O60476 641 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 PRSS23O95084 383 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 ITGALP20701 1170 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 ACRV1P26436 265 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 ALDH7A1P49419 539 aaKnown RBP24.79■■□□□ 1.56
HOXB3-201ENST00000311626 FAM117BQ6P1L5 589 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 TPGS1Q6ZTW0 290 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 DET1Q7L5Y6 550 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 SNX20Q7Z614 316 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 THAP5Q7Z6K1 395 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 TMCO2Q7Z6W1 182 aaPredicted RBP24.79■■□□□ 1.56
HOXB3-201ENST00000311626 FNDC8Q8TC99 324 aa24.79■■□□□ 1.56
HOXB3-201ENST00000311626 SKA2Q8WVK7 121 aaPredicted RBP24.79■■□□□ 1.56
HOXB3-201ENST00000311626 ALG14Q96F25 216 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms