RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 FCHO1O14526 889 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SLC31A1O15431 190 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DLX3O60479 287 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ABCB7O75027 752 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IFNW1P05000 195 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PECAM1P16284 738 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KCNA5P22460 613 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IL12AP29459 219 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CCT3P49368 545 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PRKAG1P54619 331 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MRPS21P82921 87 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OC90Q02509 493 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CD47Q08722 323 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NPTX1Q15818 432 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CDCA2Q69YH5 1023 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SLC15A3Q8IY34 581 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CCDC36Q8IYA8 594 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZZZ3Q8IYH5 903 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PTGR2Q8N8N7 351 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OR4K2Q8NGD2 314 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MBOAT7Q96N66 472 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PITHD1Q9GZP4 211 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 GPN1Q9HCN4 374 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 POLE4Q9NR33 117 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RYDENQ9NUL5 291 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TAS2R14Q9NYV8 317 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 L1RE1Q9UN81 338 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LIPT1Q9Y234 373 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM25AB3EWG3 89 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM25CB3EWG5 89 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM25GB3EWG6 89 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TIMP1P01033 207 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SLC10A3P09131 477 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TM4SF4P48230 202 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TGFBR3Q03167 851 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LMAN2Q12907 356 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HERC3Q15034 1050 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NOMO1Q15155 1222 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SLC14A2Q15849 920 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SMU1Q2TAY7 513 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TNFAIP8L3Q5GJ75 292 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IRGCQ6NXR0 463 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LAYNQ6UX15 382 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TDRPQ86YL5 185 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 C12orf29Q8N999 325 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FLCNQ8NFG4 579 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SGF29Q96ES7 293 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OXNAD1Q96HP4 312 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZBTB45Q96K62 511 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TRAPPC9Q96Q05 1148 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KLHL31Q9H511 634 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RBPJLQ9UBG7 517 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TELO2Q9Y4R8 837 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SPO11Q9Y5K1 396 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DNMT3AQ9Y6K1 912 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM205CA6NFA0 338 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM189-UBE2V1I3L0A0 370 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PLD2O14939 933 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FOXN1O15353 648 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 INPPL1O15357 1258 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PSIP1O75475 530 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CLEC3AO75596 197 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RGS20O76081 388 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SPATA31D3P0C874 917 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FKBP2P26885 142 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PRDX6P30041 224 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OMPP47874 163 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DHPSP49366 369 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LIMK2P53671 638 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MLLT6P55198 1093 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 EEFSECP57772 596 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 USP46P62068 366 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PITPNAQ00169 270 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FMO1Q01740 532 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FOXM1Q08050 763 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MBLAC2Q68D91 279 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM151BQ6UXP7 276 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SPATA31D4Q6ZUB0 917 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PLA2G15Q8NCC3 412 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CEP76Q8TAP6 659 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FBXO30Q8TB52 745 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 C12orf66Q96MD2 445 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HDHD2Q9H0R4 259 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TFB2MQ9H5Q4 396 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MKKSQ9NPJ1 570 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PAK1IP1Q9NWT1 392 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 P2RX2Q9UBL9 471 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PPIEQ9UNP9 301 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CHKBQ9Y259 395 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FTCDNL1E5RQL4 147 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RRP8O43159 456 aaKnown RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 DCXO43602 365 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 PIGNO95427 931 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 LCA5LO95447 670 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 ZCCHC18P0CG32 403 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 HOXB9P17482 250 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-201ENST00000309964 UGT1A4P22310 534 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 VIPR1P32241 457 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 UGT1A3P35503 534 aa3.13□□□□□ -1.91
CLOCK-201ENST00000309964 RPS9P46781 194 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms