RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 CMTM6Q9NX76 183 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ACTR3BQ9P1U1 418 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 DNMT3LQ9UJW3 386 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 BRCA1P38398 1863 aaKnown RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 TNS1Q9HBL0 1735 aaKnown RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 INHAP05111 366 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ATP6V1E1P36543 226 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 TXNL4AP83876 142 aaKnown RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 VEPH1Q14D04 833 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 UBE2UQ5VVX9 321 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 NADSYN1Q6IA69 706 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 HMBOX1Q6NT76 420 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF549Q6P9A3 640 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.44□□□□□ -0.423e-8■□□□□ 8.8
RETREG3-201ENST00000309428 RNF175Q8N4F7 328 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ZDHHC6Q9H6R6 413 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 VCANP13611 3396 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 SLC38A8A6NNN8 435 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 TRIM24O15164 1050 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 RPP40O75818 363 aaKnown RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PPP3CCP48454 512 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PLA2G16P53816 162 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 IL2P60568 153 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 RPL26P61254 145 aaKnown RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PTGR1Q14914 329 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 SF1Q15637 639 aaKnown RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 CARM1Q86X55 608 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PHF21AQ96BD5 680 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 BIRC8Q96P09 236 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 CORO1BQ9BR76 489 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 SIAEQ9HAT2 523 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PDP1Q9P0J1 537 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 SH3BP4Q9P0V3 963 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 LOC110117498-PIK3R3F6TDL0 507 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ACSL4O60488 711 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 S100A3P33764 101 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 HPCAL1P37235 193 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 RPS3AP61247 264 aaKnown RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 MSANTD2Q6P1R3 559 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF773Q6PK81 442 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 Q6ZNX1 250 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ANKS3Q6ZW76 656 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 BTLAQ7Z6A9 289 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ITIH5Q86UX2 942 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 FRS2Q8WU20 508 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ACDQ96AP0 544 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 NANOGQ9H9S0 305 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF556Q9HAH1 456 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 C14orf119Q9NWQ9 140 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 IKZF3Q9UKT9 509 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 DUSP12Q9UNI6 340 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 FAM32AQ9Y421 112 aaKnown RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF99A8MXY4 864 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 COCHO43405 550 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 MITFO75030 526 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 BCAS1O75363 584 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 CLDN7O95471 211 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ALDOCP09972 364 aaKnown RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 XPAP23025 273 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 SOAT1P35610 550 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PFKPQ01813 784 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 CBX2Q14781 532 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 SPCS2Q15005 226 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 UAP1L1Q3KQV9 507 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PAGE3Q5JUK9 113 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 RFLNAQ6ZTI6 216 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 CAMKK1Q8N5S9 505 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 AMER2Q8N7J2 671 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 STON2Q8WXE9 905 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ROPN1LQ96C74 230 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 TEX37Q96LM6 180 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 APOL4Q9BPW4 351 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 COPS4Q9BT78 406 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ELOVL6Q9H5J4 265 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 MAP10Q9P2G4 905 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF451Q9Y4E5 1061 aa12.43□□□□□ -0.42
RETREG3-201ENST00000309428 DNMT3AQ9Y6K1 912 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-201ENST00000309428 BPTFQ12830 3046 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 EFCAB10A6NFE3 127 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 SMAD6O43541 496 aaKnown RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 LDB2O43679 373 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 AIREO43918 545 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 SLC25A14O95258 325 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 MSH3P20585 1137 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 IMPDH1P20839 514 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 SLC6A2P23975 617 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 GABRR2P28476 465 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 SERINC3Q13530 473 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 ACAP2Q15057 778 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 ANKRD34AQ69YU3 496 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 FAM45BPQ6NSW5 357 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 FAM180BQ6P0A1 224 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 KDELC1Q6UW63 502 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 CLEC14AQ86T13 490 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 FAM45AQ8TCE6 357 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms