RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ANKRA2Q9H9E1 313 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 KCNH4Q9UQ05 1017 aa18.99■□□□□ 0.63
USP48-201ENST00000308271 PHRF1Q9P1Y6 1649 aaKnown RBP18.99■□□□□ 0.63
USP48-201ENST00000308271 LCHNA4D1U4 455 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 AGRPO00253 132 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 ZNF45Q02386 682 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 TAF10Q12962 218 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 COQ5Q5HYK3 327 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 GPC2Q8N158 579 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 OR52L1Q8NGH7 329 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 PYURFQ96I23 114 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 DERL2Q9GZP9 239 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 ENTPD4Q9Y227 616 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 CCDC88AQ3V6T2 1871 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 FFAR2O15552 330 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 RPN2P04844 631 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 RFX3P48380 749 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 MYRFLQ96LU7 910 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 SEZ6LQ9BYH1 1024 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 SNTG1Q9NSN8 517 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 EXD2Q9NVH0 621 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 PHF11Q9UIL8 331 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 NOTOA8MTQ0 251 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 STX16O14662 325 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 SLC5A2P31639 672 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 RABGGTBP53611 331 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 MXD1Q05195 221 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 ABHD18Q0P651 414 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 LAPTM5Q13571 262 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 NDUFAF6Q330K2 333 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 ZNF517Q6ZMY9 492 aaPredicted RBP18.98■□□□□ 0.63
USP48-201ENST00000308271 MTSS1LQ765P7 747 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 SLC15A4Q8N697 577 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 HJURPQ8NCD3 748 aaPredicted RBP18.98■□□□□ 0.63
USP48-201ENST00000308271 KCNA7Q96RP8 456 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 MED28Q9H204 178 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 SGK2Q9HBY8 427 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 MAN2B2Q9Y2E5 1009 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 H3BMQ9 156 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 UGT2B17O75795 530 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 PRAMEF1O95521 474 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 CHRNA1P02708 482 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 GSTM2P28161 218 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 NUP62P37198 522 aaPredicted RBP18.98■□□□□ 0.63
USP48-201ENST00000308271 HKDC1Q2TB90 917 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 COG8Q96MW5 612 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 RNF6Q9Y252 685 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 PCDHB3Q9Y5E6 796 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 PCDHGC4Q9Y5F7 938 aa18.98■□□□□ 0.63
USP48-201ENST00000308271 TCAF2A6NFQ2 919 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 TBL1XO60907 577 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 URODP06132 367 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 ANXA4P09525 319 aaPredicted RBP18.97■□□□□ 0.63
USP48-201ENST00000308271 PRKAG1P54619 331 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 SLC10A7Q0GE19 358 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 IQCCQ4KMZ1 466 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 SIRPB2Q5JXA9 342 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 PDE12Q6L8Q7 609 aaKnown RBP18.97■□□□□ 0.63
USP48-201ENST00000308271 CMTR2Q8IYT2 770 aaKnown RBP18.97■□□□□ 0.63
USP48-201ENST00000308271 C10orf53Q8N6V4 93 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 RPS6KB2Q9UBS0 482 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 PRSS51A0A1B0GVH4 220 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 UBE2QL1A1L167 161 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 G6PDP11413 515 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 TCF3P15923 654 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 PRKACGP22612 351 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 ZNF157P51786 506 aaPredicted RBP18.97■□□□□ 0.63
USP48-201ENST00000308271 GABARAPL2P60520 117 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 ABRQ12979 859 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 ANKRD13BQ86YJ7 626 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 TRPV1Q8NER1 839 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 TRPV5Q9NQA5 729 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 OR6C75A6NL08 312 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 CHST10O43529 356 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 DCST1Q5T197 706 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 PEX5LQ8IYB4 626 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 OR10G2Q8NGC3 310 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 GTPBP3Q969Y2 492 aaKnown RBP18.97■□□□□ 0.63
USP48-201ENST00000308271 POPDC3Q9HBV1 291 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.97■□□□□ 0.63
USP48-201ENST00000308271 NWD2Q9ULI1 1742 aa18.97■□□□□ 0.63
USP48-201ENST00000308271 A0A1W2PQ72 361 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 C9IYK1 514 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 LEPRP48357 1165 aaKnown RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 HMGCS1Q01581 520 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 NOMO2Q5JPE7 1267 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 MACC1Q6ZN28 852 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 USP30Q70CQ3 517 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 ZDHHC6Q9H6R6 413 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 EMCNQ9ULC0 261 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 SLC27A5Q9Y2P5 690 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 NIPSNAP2O75323 286 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 TNNI3P19429 210 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 CD72P21854 359 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 ATN1P54259 1190 aaPredicted RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 GRM2Q14416 872 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 ACOX1Q15067 660 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 RFTN2Q52LD8 501 aaPredicted RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 ASZ1Q8WWH4 475 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 TFAP2CQ92754 450 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms