RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 KEAP1Q14145 624 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TMEM132AQ24JP5 1023 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 RGS21Q2M5E4 152 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PRAMEF9Q5VWM5 478 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 NADSYN1Q6IA69 706 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 LAYNQ6UX15 382 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 GDPD3Q7L5L3 318 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CYP2U1Q7Z449 544 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CCDC190Q86UF4 302 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PROSER1Q86XN7 944 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 FBXO22Q8NEZ5 403 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 MDGA1Q8NFP4 955 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 OR4C15Q8NGM1 316 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 LINC01599Q8WXQ3 324 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 RPL3LQ92901 407 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 C7orf34Q96L11 122 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ZFP42Q96MM3 310 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 SOSTQ9BQB4 213 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TSEN34Q9BSV6 310 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 CLMPQ9H6B4 373 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ALG9Q9H6U8 611 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 AGO3Q9H9G7 860 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS50-202ENST00000305866 VPS51Q9UID3 782 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PKP3Q9Y446 797 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 GPC6Q9Y625 555 aaPredicted RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 LOC105371267A0A1B0GV96 52 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CCDC160A6NGH7 325 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CLDN25C9JDP6 229 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 EIF3FO00303 357 aaPredicted RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 CCL22O00626 93 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 KDELR3O43731 214 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 GREM1O60565 184 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 MRPS14O60783 128 aaKnown RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 CNOT3O75175 753 aaKnown RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 E2F6O75461 281 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ECI2O75521 394 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ESRRBO95718 433 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 RETP07949 1114 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 THRBP10828 461 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CASP3P42574 277 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CDKN1CP49918 316 aaPredicted RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 VASPP50552 380 aaPredicted RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 TRIM32Q13049 653 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 TAF1AQ15573 450 aaPredicted RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 SUSD1Q6UWL2 747 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 TRIM46Q7Z4K8 759 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 THAP5Q7Z6K1 395 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 RTN4RL1Q86UN2 441 aaPredicted RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 MIER2Q8N344 545 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CD200R1Q8TD46 325 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 MAGEE2Q8TD90 523 aaPredicted RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 HCAR2Q8TDS4 363 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 USP7Q93009 1102 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 REPS1Q96D71 796 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 PSKH2Q96QS6 385 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ZNF382Q96SR6 550 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 TMEM175Q9BSA9 504 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 MAGEH1Q9H213 219 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 TBC1D23Q9NUY8 699 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 KLK14Q9P0G3 267 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ERVK-18Q9QC07 812 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 SLC6A14Q9UN76 642 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 TRAPPC4Q9Y296 219 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 AP3M1Q9Y2T2 418 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 OR51B4Q9Y5P0 310 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 V9GYH0 126 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ANKRD34BA5PLL1 514 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 MYADML2A6NDP7 307 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 NR5A2O00482 541 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 MITFO75030 526 aaPredicted RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 LINC00032P0C843 101 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 FCGR1AP12314 374 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 MAP2K4P45985 399 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 MVDP53602 400 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ERVK-8P63133 956 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 SLC10A7Q0GE19 358 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 DNASE1L3Q13609 305 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 HKDC1Q2TB90 917 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 USP39Q53GS9 565 aaKnown RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 LDLRAP1Q5SW96 308 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 ATAD3BQ5T9A4 648 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 BROXQ5VW32 411 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 TMEM236Q5W0B7 351 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 SHQ1Q6PI26 577 aaKnown RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 METTL23Q86XA0 190 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 PTOV1Q86YD1 416 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CCDC103Q8IW40 242 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 AFAP1L2Q8N4X5 818 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 AADATQ8N5Z0 425 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 NAT16Q8N8M0 369 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CCNYQ8ND76 341 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 OR4M1Q8NGD0 313 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 OR52B6Q8NGF0 335 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 CNIH3Q8TBE1 160 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 PHF21BQ96EK2 531 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 TRMT2BQ96GJ1 504 aaKnown RBP5.34□□□□□ -1.55
VPS50-202ENST00000305866 LMLNQ96KR4 655 aa5.34□□□□□ -1.55
VPS50-202ENST00000305866 RDH14Q9HBH5 336 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms