RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 KCNK4Q9NYG8 393 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 PCDHGA1Q9Y5H4 931 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 NFS1Q9Y697 457 aa23.85■■□□□ 1.41
HOXC9-201ENST00000303450 HMX2A2RU54 273 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 PHGDHO43175 533 aaKnown RBP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 KRT37O76014 449 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 MATN4O95460 622 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 PRKG2Q13237 762 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 PUM1Q14671 1186 aaKnown RBP eCLIP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 NR1D2Q14995 579 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 PLCL1Q15111 1095 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 ADGRD1Q6QNK2 874 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 RAPH1Q70E73 1250 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 MYO1HQ8N1T3 1032 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 NKAPQ8N5F7 415 aaKnown RBP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 HGH1Q9BTY7 390 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 ABCG4Q9H172 646 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 KIR3DX1Q9H7L2 352 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 PPCSQ9HAB8 311 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 PSMC3IPQ9P2W1 217 aaPredicted RBP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 POLG2Q9UHN1 485 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 APOBEC2Q9Y235 224 aaKnown RBP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 FTH1P19P0C7X4 201 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 CRABP2P29373 138 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 MAPK9P45984 424 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 PPM1FP49593 454 aaPredicted RBP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 OR1D5P58170 312 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 ZKSCAN8Q15776 578 aaPredicted RBP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 TTC23LQ6PF05 361 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 TMEM207Q6UWW9 146 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 CYHR1Q6ZMK1 362 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 SPRED1Q7Z699 444 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 CMC1Q7Z7K0 106 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 TBC1D10AQ9BXI6 508 aa23.84■■□□□ 1.41
HOXC9-201ENST00000303450 TDRKHQ9Y2W6 561 aaKnown RBP23.84■■□□□ 1.41
HOXC9-201ENST00000303450 LILRA5A6NI73 299 aa23.83■■□□□ 1.41
HOXC9-201ENST00000303450 NUDT17P0C025 328 aa23.83■■□□□ 1.41
HOXC9-201ENST00000303450 SERPINB8P50452 374 aa23.83■■□□□ 1.41
HOXC9-201ENST00000303450 IFFO1Q0D2I5 559 aa23.83■■□□□ 1.41
HOXC9-201ENST00000303450 SLCO6A1Q86UG4 719 aa23.83■■□□□ 1.41
HOXC9-201ENST00000303450 DCUN1D3Q8IWE4 304 aa23.83■■□□□ 1.41
HOXC9-201ENST00000303450 AHCYL2Q96HN2 611 aaKnown RBP23.83■■□□□ 1.41
HOXC9-201ENST00000303450 TRIM49D1C9J1S8 452 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 C1orf105O95561 183 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 TSPAN12O95859 305 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 SNRPAP09012 282 aaKnown RBP23.82■■□□□ 1.4
HOXC9-201ENST00000303450 CDK4P11802 303 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 TYK2P29597 1187 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 EPHA4P54764 986 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 E2F1Q01094 437 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 AMZ1Q400G9 498 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 MAGEC3Q8TD91 643 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 ASB11Q8WXH4 323 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 SYNDIG1Q9H7V2 258 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 SNX15Q9NRS6 342 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 UNC13CQ8NB66 2214 aa23.82■■□□□ 1.4
HOXC9-201ENST00000303450 IQANK1A0A1B0GTG1 560 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 SMIM23A6NLE4 172 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 B4GAT1O43505 415 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 KDM1AO60341 852 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 PSIP1O75475 530 aaKnown RBP23.81■■□□□ 1.4
HOXC9-201ENST00000303450 CATP04040 527 aaKnown RBP23.81■■□□□ 1.4
HOXC9-201ENST00000303450 RPLP0P05388 317 aaKnown RBP23.81■■□□□ 1.4
HOXC9-201ENST00000303450 CCNFP41002 786 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 SLCO1A2P46721 670 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 CCL7P80098 99 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 GPLD1P80108 840 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 CNPY4Q8N129 248 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 OR52E1Q8NGJ3 308 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 OR10G6Q8NH81 332 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 OR2W6PQ8NHA6 318 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 ANKRD49Q8WVL7 239 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 LCN9Q8WX39 176 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 JPH3Q8WXH2 748 aaPredicted RBP23.81■■□□□ 1.4
HOXC9-201ENST00000303450 MTBPQ96DY7 904 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 PDLIM5Q96HC4 596 aaKnown RBP23.81■■□□□ 1.4
HOXC9-201ENST00000303450 LRRN3Q9H3W5 708 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 TBK1Q9UHD2 729 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 TLK1Q9UKI8 766 aa23.81■■□□□ 1.4
HOXC9-201ENST00000303450 IGHV1OR21-1A0A087WYE8 117 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 ZBTB14O43829 449 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 UBXN7O94888 489 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 WISP3O95389 354 aaPredicted RBP23.8■■□□□ 1.4
HOXC9-201ENST00000303450 ALDOAP04075 364 aaKnown RBP23.8■■□□□ 1.4
HOXC9-201ENST00000303450 CCDC166P0CW27 439 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 AMD1P17707 334 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 BDKRB1P46663 353 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 ID4P47928 161 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 EPS8L3Q8TE67 593 aaKnown RBP23.8■■□□□ 1.4
HOXC9-201ENST00000303450 RAD51AP1Q96B01 352 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 PLAAQ9Y263 795 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 ACOT9Q9Y305 439 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 SPTBN4Q9H254 2564 aa23.8■■□□□ 1.4
HOXC9-201ENST00000303450 OPA1O60313 960 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 TCEA3O75764 348 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 C8GP07360 202 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 SLC35E2BP0CK96 405 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 MAP4P27816 1152 aaKnown RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 TAF1BQ53T94 588 aaPredicted RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 NKAIN2Q5VXU1 208 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms