RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TPRKBQ9Y3C4 175 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 LOC730098B7Z3J9 87 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 H3BN98 237 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 H7C4K7 107 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 FKTNO75072 461 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 TTKP33981 857 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 KPNA1P52294 538 aaPredicted RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 NUDT6P53370 316 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 SERINC3Q13530 473 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 DAG1Q14118 895 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ANKDD1AQ495B1 522 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 CYP27C1Q4G0S4 372 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 TRMT11Q7Z4G4 463 aaKnown RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 KIAA1191Q96A73 305 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 COPS8Q99627 209 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 HEPHQ9BQS7 1158 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ZNF696Q9H7X3 374 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 POLE4Q9NR33 117 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 KRT84Q9NSB2 600 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 SLC13A4Q9UKG4 626 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ZNF451Q9Y4E5 1061 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 SERPINB7O75635 380 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ZNF26P17031 533 aaPredicted RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 RGRP47804 291 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 EMP3P54852 163 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 TMEM207Q6UWW9 146 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 RNF19BQ6ZMZ0 732 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 PRR23BQ6ZRT6 265 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 PROSER1Q86XN7 944 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 STK40Q8N2I9 435 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 CNIH3Q8TBE1 160 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 MYO19Q96H55 970 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 C2orf49Q9BVC5 232 aaPredicted RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 FARSBQ9NSD9 589 aaKnown RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 DUSP12Q9UNI6 340 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 MAP1BP46821 2468 aaKnown RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 SAP18O00422 153 aaKnown RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 KPNA3O00505 521 aaPredicted RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 ACOT8O14734 319 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 CLDN11O75508 207 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 MFN2O95140 757 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 JAK1P23458 1154 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ARSFP54793 590 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 SEMA3AQ14563 771 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 AAK1Q2M2I8 961 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 RFTN2Q52LD8 501 aaPredicted RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 TTC23LQ6PF05 361 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ALKAL1Q6UXT8 129 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ZNF366Q8N895 744 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 PIK3C3Q8NEB9 887 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 TEX37Q96LM6 180 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 RANBP9Q96S59 729 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 TTPALQ9BTX7 342 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 RPF2Q9H7B2 306 aaKnown RBP13.79□□□□□ -0.2
SDC2-201ENST00000302190 LTB4R2Q9NPC1 389 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 USE1Q9NZ43 259 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 GNPTGQ9UJJ9 305 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 TESMINQ9Y4I5 508 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 A0A0C4DFX4 3053 aa13.79□□□□□ -0.2
SDC2-201ENST00000302190 ASCC3Q8N3C0 2202 aaKnown RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 MUSKO15146 869 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 KRT8P05787 483 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 SMIM18P0DKX4 95 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 TUFMP49411 452 aaKnown RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 DNASE1L3Q13609 305 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 ENPP6Q6UWR7 440 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 LARP4Q71RC2 724 aaKnown RBP eCLIP13.78□□□□□ -0.2
SDC2-201ENST00000302190 PIWIL3Q7Z3Z3 882 aaKnown RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 FUNDC1Q8IVP5 155 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 ZDHHC21Q8IVQ6 265 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 RBFAQ8N0V3 343 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 SIX5Q8N196 739 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 TMEM102Q8N9M5 508 aaPredicted RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 TMEM159Q96B96 161 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 APOL4Q9BPW4 351 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 BOCQ9BWV1 1114 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 CAPN10Q9HC96 672 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 REV3LO60673 3130 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 GLYATL1P3A0A0U1RQE8 302 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 A0A1B0GTL3 188 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 CYP7B1O75881 506 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 KCNAB2Q13303 367 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 ABRAXAS2Q15018 415 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 PPP4R4Q6NUP7 873 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 HIPK1Q86Z02 1210 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 PSD4Q8NDX1 1056 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 HM13Q8TCT9 377 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 ATAD3AQ9NVI7 634 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 LCHNA4D1U4 455 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 KPNA4O00629 521 aaPredicted RBP13.78□□□□□ -0.2
SDC2-201ENST00000302190 LDB2O43679 373 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 GSTM1P09488 218 aa13.78□□□□□ -0.2
SDC2-201ENST00000302190 RAP2AP10114 183 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms