RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 HIPK3Q9H422 1215 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 RETREG1Q9H6L5 497 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF334Q9HCZ1 680 aaPredicted RBP12.65□□□□□ -0.39
HIF3A-204ENST00000300862 SLC6A13Q9NSD5 602 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 OPTCQ9UBM4 332 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 MAGEL2Q9UJ55 1249 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF490Q9ULM2 529 aaPredicted RBP12.65□□□□□ -0.39
HIF3A-204ENST00000300862 CPQQ9Y646 472 aa12.65□□□□□ -0.39
HIF3A-204ENST00000300862 TRIM64A6NGJ6 449 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 H3BMQ9 156 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SEC22BO75396 215 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 ANXA6P08133 673 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 CDH1P12830 882 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 RGS4P49798 205 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 BCL2L1Q07817 233 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 BFSP2Q13515 415 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 KIAA0040Q15053 153 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 CPSF6Q16630 551 aaKnown RBP eCLIP12.64□□□□□ -0.39
HIF3A-204ENST00000300862 LRRC73Q5JTD7 316 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 CERS6Q6ZMG9 384 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 ZBTB46Q86UZ6 589 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 CLEC4FQ8N1N0 589 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 ADAMTS16Q8TE57 1224 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 AURKBQ96GD4 344 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-204ENST00000300862 IGSF21Q96ID5 467 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 COG8Q96MW5 612 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 CXorf21Q9HAI6 301 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SMURF2Q9HAU4 748 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 TUBA8Q9NY65 449 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-204ENST00000300862 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 GNPTGQ9UJJ9 305 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 OARD1Q9Y530 152 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 PCDHGA11Q9Y5H2 935 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 CBFA2T3O75081 653 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 KCNH1O95259 989 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 TRBC1P01850 177 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 ALBP02768 609 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 ITGALP20701 1170 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SHMT2P34897 504 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 MTHFRP42898 656 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 FXNQ16595 210 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 IMPG1Q17R60 797 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SUSD1Q6UWL2 747 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 KCTD8Q6ZWB6 473 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SNX20Q7Z614 316 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SLC22A15Q8IZD6 547 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 RGL4Q8IZJ4 473 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 ZBTB2Q8N680 514 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 OR2T12Q8NG77 320 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 TBC1D15Q8TC07 691 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SGCDQ92629 289 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 GTF2H4Q92759 462 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 RHBDF1Q96CC6 855 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 TSEN34Q9BSV6 310 aaKnown RBP12.64□□□□□ -0.39
HIF3A-204ENST00000300862 CD244Q9BZW8 370 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 SLC25A37Q9NYZ2 338 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 DOLKQ9UPQ8 538 aa12.64□□□□□ -0.39
HIF3A-204ENST00000300862 GLYATL1P3A0A0U1RQE8 302 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 A0A1W2PPW3 197 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ARNTLO00327 626 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GSTA4O15217 222 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 NOBOXO60393 691 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GREM1O60565 184 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ULK1O75385 1050 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ABLIM3O94929 683 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GLUD1P00367 558 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 INHBBP09529 407 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GGT1P19440 569 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 JAK1P23458 1154 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 DGKAP23743 735 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 EEF1B2P24534 225 aaKnown RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ACRV1P26436 265 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 POLR2IP36954 125 aaKnown RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 NEK2P51955 445 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ATN1P54259 1190 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ARSFP54793 590 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ADARB1P78563 741 aaKnown RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 RAB39AQ14964 217 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GPRC6AQ5T6X5 926 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 TMEM26Q6ZUK4 368 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 MSRB3Q8IXL7 192 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 HJURPQ8NCD3 748 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 PPP3R2Q96LZ3 170 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 DPY30Q9C005 99 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 PAIP1Q9H074 479 aaKnown RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 HMX1Q9NP08 348 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 CD320Q9NPF0 282 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 TBC1D23Q9NUY8 699 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ADGRE2Q9UHX3 823 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 BACE2Q9Y5Z0 518 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 NPIPB15A6NHN6 443 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 HOXA2O43364 376 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 RGS14O43566 566 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ALDH1A1P00352 501 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 NPPAP01160 153 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GSNP06396 782 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms