RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RAB43Q86YS6 212 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PEX5LQ8IYB4 626 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OR8H1Q8NGG4 311 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HEPHQ9BQS7 1158 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC25A51Q9H1U9 297 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 COMMD3Q9UBI1 195 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RIMKLBQ9ULI2 386 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 A0A1W2PRU2 124 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MID1O15344 667 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PTGIRP43119 386 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ALDH3A2P51648 485 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RTP1P59025 263 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 UBXN2BQ14CS0 331 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CRTC2Q53ET0 693 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 C2orf27AQ580R0 203 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PLET1Q6UQ28 207 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RPS27LQ71UM5 84 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CCDC28BQ9BUN5 200 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FBXW11Q9UKB1 542 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FKBP7Q9Y680 259 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 IRGMA1A4Y4 181 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 WRBO00258 174 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PDPK1O15530 556 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OPN1SWP03999 348 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CFHP08603 1231 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 IL7RP16871 459 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GRIA1P42261 906 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DGKGP49619 791 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TMEM198Q66K66 360 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ERICH5Q6P6B1 374 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TMC8Q8IU68 726 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FBXO22Q8NEZ5 403 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TNFAIP8L1Q8WVP5 186 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TAPBPLQ9BX59 468 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RNF121Q9H920 327 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TRPS1Q9UHF7 1281 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 A0A1W2PQ72 361 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CPN2P22792 545 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ADAM17P78536 824 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CCL14Q16627 93 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 AMBNQ9NP70 447 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CLDN4O14493 209 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZNF208O43345 1280 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HCRTO43612 131 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PAPSS2O95340 614 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PSMA1P25786 263 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HNRNPH3P31942 346 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ODF4Q2M2E3 257 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CAND1Q86VP6 1230 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC38A4Q969I6 547 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 C1QTNF8P60827 252 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PPP3R1P63098 170 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NFKB2Q00653 900 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PIM3Q86V86 326 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 C11orf65Q8NCR3 313 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OR4C6Q8NH72 309 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TRMOQ9BU70 441 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CADM1Q9BY67 442 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ELOVL2Q9NXB9 296 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TBC1D14Q9P2M4 693 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RAB26Q9ULW5 256 aa13.35□□□□□ -0.27
CHRFAM7A-201ENST00000299847 B3GALT2O43825 422 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SERPINA3P01011 423 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CSTF1Q05048 431 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FUT2Q10981 343 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PPP1R8Q12972 351 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TOR1AIP1Q5JTV8 583 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 P2RY8Q86VZ1 359 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 C7orf26Q96N11 449 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GKN1Q9NS71 199 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MARK1Q9P0L2 795 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 A0A1B0GVM2 712 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TCAF2A6NFQ2 919 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ANXA2P2A6NMY6 339 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TMEM233B4DJY2 109 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ADAMTS3O15072 1205 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FGF19O95750 216 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ANXA2P07355 339 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GMFBP60983 142 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HMGCS1Q01581 520 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SP2Q02086 613 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZCCHC12Q6PEW1 402 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CTU1Q7Z7A3 348 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RANBP3LQ86VV4 465 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PCDH19Q8TAB3 1148 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HM13Q8TCT9 377 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FAM129BQ96TA1 746 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GATA5Q9BWX5 397 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 B3GNT4Q9C0J1 378 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CDH7Q9ULB5 785 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ERVK-11Q9UQG0 969 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NIPSNAP2O75323 286 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 POP4O95707 220 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 BDKRB1P46663 353 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms