RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDH8-201ENST00000299345 GRXCR2A6NFK2 248 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 TAPBPO15533 448 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 WDR47O94967 919 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 PGRP06401 933 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 RAP2AP10114 183 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 JAK1P23458 1154 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 RPL10P27635 214 aaKnown RBP13.34□□□□□ -0.27
CDH8-201ENST00000299345 DGKKQ5KSL6 1271 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 GPRC6AQ5T6X5 926 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 DTWD1Q8N5C7 304 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 ALG14Q96F25 216 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 SMG9Q9H0W8 520 aaKnown RBP13.34□□□□□ -0.27
CDH8-201ENST00000299345 SOX17Q9H6I2 414 aaPredicted RBP13.34□□□□□ -0.27
CDH8-201ENST00000299345 RMND5AQ9H871 391 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 SNX6Q9UNH7 406 aa13.34□□□□□ -0.27
CDH8-201ENST00000299345 CYP4F3Q08477 520 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 SELPLGQ14242 412 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 KCTD21Q4G0X4 260 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CRTC1Q6UUV9 634 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
CDH8-201ENST00000299345 HERC2P3Q9BVR0 1158 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CD84Q9UIB8 345 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CLEC4EQ9ULY5 219 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 ELOVL7A1L3X0 281 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CXCL10P02778 98 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CDH2P19022 906 aaPredicted RBP13.33□□□□□ -0.28
CDH8-201ENST00000299345 MYF6P23409 242 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 MTHFRP42898 656 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 MRPL19P49406 292 aaKnown RBP13.33□□□□□ -0.28
CDH8-201ENST00000299345 TRIM60Q495X7 471 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 TMEM150AQ86TG1 271 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 FAM9CQ8IZT9 166 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CRIPAKQ8N1N5 446 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 FIBINQ8TAL6 211 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 MCOLN3Q8TDD5 553 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 VAPAQ9P0L0 249 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 SNAP29O95721 258 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 C7P10643 843 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CYP2A7P20853 494 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.28
CDH8-201ENST00000299345 PRMT2P55345 433 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 POLR2LP62875 67 aaKnown RBP13.33□□□□□ -0.28
CDH8-201ENST00000299345 AAK1Q2M2I8 961 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 PLA2G4EQ3MJ16 856 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 ATP13A5Q4VNC0 1218 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 DLEU7Q6UYE1 221 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 CBARPQ8N350 705 aaPredicted RBP13.33□□□□□ -0.28
CDH8-201ENST00000299345 KRTCAP2Q8N6L1 136 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 LEMD2Q8NC56 503 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 OR8J3Q8NGG0 315 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 PYCR2Q96C36 320 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 TRPS1Q9UHF7 1281 aa13.33□□□□□ -0.28
CDH8-201ENST00000299345 THSD7BQ9C0I4 1608 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 POP4O95707 220 aaKnown RBP13.32□□□□□ -0.28
CDH8-201ENST00000299345 CST1P01037 141 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 GSNP06396 782 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 MAPK1P28482 360 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 NNMTP40261 264 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 DDX39BQ13838 428 aaKnown RBP13.32□□□□□ -0.28
CDH8-201ENST00000299345 SCRN2Q96FV2 425 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 POLR1BQ9H9Y6 1135 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 ASAH2Q9NR71 780 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 BAG5Q9UL15 447 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 FAF1Q9UNN5 650 aaPredicted RBP13.32□□□□□ -0.28
CDH8-201ENST00000299345 ORC6Q9Y5N6 252 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 C8AP07357 584 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 SRCP12931 536 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 HRH2P25021 359 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 CTSOP43234 321 aaPredicted RBP13.32□□□□□ -0.28
CDH8-201ENST00000299345 RPS14P62263 151 aaKnown RBP13.32□□□□□ -0.28
CDH8-201ENST00000299345 ZXDBP98169 803 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 LRRC23Q53EV4 343 aaPredicted RBP13.32□□□□□ -0.28
CDH8-201ENST00000299345 C22orf39Q6P5X5 142 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 BORAQ6PGQ7 559 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 Q6ZNB5 142 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 GAREM2Q75VX8 874 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 SPRED1Q7Z699 444 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
CDH8-201ENST00000299345 TMEM132CQ8N3T6 1108 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 ZNF555Q8NEP9 628 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 TMBIM1Q969X1 311 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 CCDC138Q96M89 665 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 AP3M1Q9Y2T2 418 aa13.32□□□□□ -0.28
CDH8-201ENST00000299345 TCRBV5S2A0A599 114 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 EVPLLA8MZ36 301 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 GRM6O15303 877 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 LRATO95237 230 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CBSLP0DN79 551 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 ITPKAP23677 461 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CA5AP35218 305 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CBSP35520 551 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 PPM1AP35813 382 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CSNK1DP48730 415 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 NEK2P51955 445 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 IL1RL1Q01638 556 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms