RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
FNDC1-201ENST00000297267 KBTBD8Q8NFY9 601 aa15.2■□□□□ 0.02
FNDC1-201ENST00000297267 DCAKDQ8WVC6 231 aa15.2■□□□□ 0.02
FNDC1-201ENST00000297267 FBXL8Q96CD0 374 aa15.2■□□□□ 0.02
FNDC1-201ENST00000297267 SUCOQ9UBS9 1254 aaKnown RBP15.2■□□□□ 0.02
FNDC1-201ENST00000297267 ADH1CP00326 375 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 TPSB2P20231 275 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 TPSAB1Q15661 275 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 MED27Q6P2C8 311 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 USP30Q70CQ3 517 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 Q8N9G6 341 aaPredicted RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 RBM4BQ9BQ04 359 aaKnown RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 RBM4Q9BWF3 364 aaKnown RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 CORO2BQ9UQ03 480 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 SPEF2Q9C093 1822 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 SMIM35A0A1B0GVV1 85 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 MATN3O15232 486 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 MID1O15344 667 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 ELK4P28324 431 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 RPS3AP61247 264 aaKnown RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 SLC10A7Q0GE19 358 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 DPYSQ14117 519 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 ACAP2Q15057 778 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 CEP68Q76N32 757 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 STRADAQ7RTN6 431 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 AKTIPQ9H8T0 292 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 ING4Q9UNL4 249 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 TCAF2A6NFQ2 919 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 PRODHO43272 600 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 MGRN1O60291 552 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 VARSP26640 1264 aaKnown RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 TUSC3Q13454 348 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 C5orf22Q49AR2 442 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 RAB6CQ53S08 254 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 OR4F3Q6IEY1 312 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 PHC3Q8NDX5 983 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 PKP2Q99959 881 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 RAB6CQ9H0N0 254 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 MAGEB17A8MXT2 336 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 AIREO43918 545 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 NME6O75414 186 aaPredicted RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 VIPP01282 170 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 FCHO2Q0JRZ9 810 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 CRTC2Q53ET0 693 aaPredicted RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 MMAAQ8IVH4 418 aaKnown RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 ZNF615Q8N8J6 731 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 CCDC120Q96HB5 630 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 CHMP1AQ9HD42 196 aaPredicted RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 NEUROD4Q9HD90 331 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 SMPD3Q9NY59 655 aaPredicted RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 GJD2Q9UKL4 321 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 STK16O75716 305 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 PRKD3O94806 890 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 SORBS2O94875 1100 aaKnown RBP15.19■□□□□ 0.02
FNDC1-201ENST00000297267 GADD45GO95257 159 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 CLDN7O95471 211 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 ATP6V0D1P61421 351 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 NDUFA5Q16718 116 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 HYAL4Q2M3T9 481 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 OAFQ86UD1 273 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 PGAM4Q8N0Y7 254 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 AIF1LQ9BQI0 150 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 PIGVQ9NUD9 493 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 SLC27A6Q9Y2P4 619 aa15.19■□□□□ 0.02
FNDC1-201ENST00000297267 A0A1W2PPK0 400 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 H3BSA7 217 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 CDC7O00311 574 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 SCGB1D2O95969 90 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 FGBP02675 491 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 XRCC1P18887 633 aaPredicted RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 CAMK1Q14012 370 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 POTEHQ6S545 545 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 PRMT5O14744 637 aaPredicted RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 CAPGP40121 348 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 RGS8P57771 180 aaPredicted RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 RPL6Q02878 288 aaKnown RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 TLR1Q15399 786 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 HSPBAP1Q96EW2 488 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 HOPXQ9BPY8 73 aaPredicted RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 OXCT2Q9BYC2 517 aaPredicted RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 DNAAF2Q9NVR5 837 aaKnown RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 ZNF221Q9UK13 617 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 GCATO75600 419 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 TRMUO75648 421 aaKnown RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 GRM2Q14416 872 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 SMG7Q92540 1137 aaKnown RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 B3GNT4Q9C0J1 378 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 A0A1W2PRG6 482 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 HLA-EP13747 358 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 HNRNPH3P31942 346 aaKnown RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 WDR4P57081 412 aaKnown RBP15.18■□□□□ 0.02
FNDC1-201ENST00000297267 KCNC4Q03721 635 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 SLC3A1Q07837 685 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 PARP15Q460N3 678 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 ZNF248Q8NDW4 579 aa15.18■□□□□ 0.02
FNDC1-201ENST00000297267 NFKBIDQ8NI38 313 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms