RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 C1QTNF3-AMACRE9PGA6 284 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 H3BM21 787 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 PLOD2O00469 737 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 MYCLP1P12525 358 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-201ENST00000296302 BRCC3P46736 316 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 VGLL4Q14135 290 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 MPP2Q14168 576 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 BTG3Q14201 252 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-201ENST00000296302 SH3PXD2AQ5TCZ1 1133 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-201ENST00000296302 CFAP52Q8N1V2 620 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 SLC43A3Q8NBI5 491 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 HDAC2Q92769 488 aaKnown RBP10.85□□□□□ -0.67
PBRM1-201ENST00000296302 CEP295NLQ96MC4 621 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 FBXL18Q96ME1 805 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF641Q96N77 438 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-201ENST00000296302 SLC39A3Q9BRY0 314 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 DUSP26Q9BV47 211 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 MMP27Q9H306 513 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 MFSD1Q9H3U5 465 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 NECTIN3Q9NQS3 549 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 GDAP2Q9NXN4 497 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 SLC27A5Q9Y2P5 690 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 PCDHGA11Q9Y5H2 935 aa10.85□□□□□ -0.67
PBRM1-201ENST00000296302 SPIN1Q9Y657 262 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-201ENST00000296302 TRIM64CA6NLI5 447 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 TEX28O15482 410 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 INSIG1O15503 277 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 C22orf31O95567 290 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 PIGRP01833 764 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 PRPS1L1P21108 318 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 CSTF2P33240 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ARF5P84085 180 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 NCBP2-AS2Q69YL0 99 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 TXNRD3NBQ6F5E7 133 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 COL21A1Q96P44 957 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 TTLL2Q9BWV7 592 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 BCL2L14Q9BZR8 327 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 AMBNQ9NP70 447 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 IQCMA0A1B0GVH7 501 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 K7EPI3 171 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 DENRO43583 198 aaKnown RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 TSPAN1O60635 241 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 CCNDBP1O95273 360 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 GNAZP19086 355 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 FPR1P21462 350 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 VARSP26640 1264 aaKnown RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ARHGDIBP52566 201 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 SLC25A11Q02978 314 aaKnown RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 IDNKQ5T6J7 187 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 XKRXQ6PP77 449 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ZC3H3Q8IXZ2 948 aaKnown RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ADGRG2Q8IZP9 1017 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 SRFBP1Q8NEF9 429 aaKnown RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 BIRC7Q96CA5 298 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 SLC7A6OSQ96CW6 309 aaPredicted RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 HMCESQ96FZ2 354 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 FBXL20Q96IG2 436 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 RNF38Q9H0F5 515 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ATG10Q9H0Y0 220 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 MALT1Q9UDY8 824 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 NDOR1Q9UHB4 597 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 LRRC14BA6NHZ5 514 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 CPNE3O75131 537 aaKnown RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 GABBR2O75899 941 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 MAGEA8P43361 318 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 CLCN4P51793 760 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF45Q02386 682 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 SULT2A1Q06520 285 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 DSC3Q14574 896 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 CBX2Q14781 532 aaPredicted RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 SERPINA9Q86WD7 417 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF516Q92618 1163 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 RERGQ96A58 199 aaPredicted RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 CDCA5Q96FF9 252 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 SLC30A2Q9BRI3 323 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 GOLGA2P5Q9HBQ8 144 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 IKZF2Q9UKS7 526 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 NCKAP1Q9Y2A7 1128 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 GTPBP1O00178 669 aaKnown RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 PDCD5O14737 125 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ACSL4O60488 711 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 SERPINA3P01011 423 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 DNTTP04053 509 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ELFN1P0C7U0 828 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 IFI30P13284 250 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF182P17025 639 aaPredicted RBP10.84□□□□□ -0.67
PBRM1-201ENST00000296302 HCAR3P49019 387 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 PCDH1Q08174 1060 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 TAF10Q12962 218 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ASRGL1Q7L266 308 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 CYP2U1Q7Z449 544 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 LGI4Q8N135 537 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 MGME1Q9BQP7 344 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 ACAT2Q9BWD1 397 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 DPEP3Q9H4B8 488 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 RNF6Q9Y252 685 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
PBRM1-201ENST00000296302 PCDHAC2Q9Y5I4 1007 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms