RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 XPO4Q9C0E2 1151 aaKnown RBP9.02□□□□□ -0.97
CNOT9-202ENST00000295701 GOLPH3Q9H4A6 298 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 TRABDQ9H4I3 376 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 KIR3DX1Q9H7L2 352 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 PCMTD2Q9NV79 361 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 KLHL8Q9P2G9 620 aaPredicted RBP9.02□□□□□ -0.97
CNOT9-202ENST00000295701 TCFL5Q9UL49 500 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 SNX7Q9UNH6 387 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 BTRCQ9Y297 605 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 ZNF451Q9Y4E5 1061 aa9.02□□□□□ -0.97
CNOT9-202ENST00000295701 GSAPA4D1B5 854 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 BTN3A1O00481 513 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 CCL22O00626 93 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 STX7O15400 261 aaKnown RBP9.01□□□□□ -0.97
CNOT9-202ENST00000295701 HCRTR1O43613 425 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 CLDN1O95832 211 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 EPOP01588 193 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 CTSBP07858 339 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 RAB40ALP0C0E4 278 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 CDH3P22223 829 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 ARHGAP25P42331 645 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 LMAN1P49257 510 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 CDKN1CP49918 316 aaPredicted RBP9.01□□□□□ -0.97
CNOT9-202ENST00000295701 SNRPNP63162 240 aaKnown RBP9.01□□□□□ -0.97
CNOT9-202ENST00000295701 TMPRSS15P98073 1019 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 XIAPP98170 497 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 ATP1A4Q13733 1029 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 TAZQ16635 292 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 PLEKHN1Q494U1 663 aaPredicted RBP9.01□□□□□ -0.97
CNOT9-202ENST00000295701 TMTC4Q5T4D3 741 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 LRRC38Q5VT99 294 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 ARMC6Q6NXE6 501 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 SPOCD1Q6ZMY3 1216 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 SLCO4C1Q6ZQN7 724 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 VSIG1Q86XK7 387 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 OR13C4Q8NGS5 318 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 DTX3LQ8TDB6 740 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 CLIP3Q96DZ5 547 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 LRFN5Q96NI6 719 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 RANBP9Q96S59 729 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 FICDQ9BVA6 458 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 NLNQ9BYT8 704 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 DEF6Q9H4E7 631 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 XKR8Q9H6D3 395 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 ASB8Q9H765 288 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 ACTR5Q9H9F9 607 aaPredicted RBP9.01□□□□□ -0.97
CNOT9-202ENST00000295701 SLAMF7Q9NQ25 335 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 LATS2Q9NRM7 1088 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 ZDHHC3Q9NYG2 299 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 HACD3Q9P035 362 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 POMT2Q9UKY4 750 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 PKP3Q9Y446 797 aa9.01□□□□□ -0.97
CNOT9-202ENST00000295701 SSU72P8A0A1W2PR75 194 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 AKR1B10O60218 316 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 DPM1O60762 260 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 PRAMEF1O95521 474 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 PRSS56P0CW18 603 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 CBSLP0DN79 551 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 HLA-DPA1P20036 260 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 PDHA2P29803 388 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 PRDX3P30048 256 aaKnown RBP9□□□□□ -0.97
CNOT9-202ENST00000295701 OTX2P32243 289 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 CBSP35520 551 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 PREPP48147 710 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 MARCKSL1P49006 195 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 NR2C2P49116 596 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 VAV2P52735 878 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 GSDMDP57764 484 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 TPM4P67936 248 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 PRKG2Q13237 762 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 MSLNQ13421 630 aaPredicted RBP9□□□□□ -0.97
CNOT9-202ENST00000295701 ITGA9Q13797 1035 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 KRT33BQ14525 404 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 LONRF2Q1L5Z9 754 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 BCL7AQ4VC05 210 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 ODF2Q5BJF6 829 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 ZDHHC20Q5W0Z9 365 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 TRIM73Q86UV7 250 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 SYTL1Q8IYJ3 562 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 DEPDC4Q8N2C3 294 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 CISD2Q8N5K1 135 aaKnown RBP9□□□□□ -0.97
CNOT9-202ENST00000295701 OR8K1Q8NGG5 319 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 OR8K5Q8NH50 307 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 ZFPM2Q8WW38 1151 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 SEC14L1Q92503 715 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 CPT1BQ92523 772 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 SNRNP40Q96DI7 357 aaKnown RBP9□□□□□ -0.97
CNOT9-202ENST00000295701 IQCDQ96DY2 449 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 HEMGNQ9BXL5 484 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 FAM60AQ9NP50 221 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 C1GALT1Q9NS00 363 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 ASF1BQ9NVP2 202 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 ZNF358Q9NW07 568 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 SMOXQ9NWM0 555 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 DDX56Q9NY93 547 aaKnown RBP9□□□□□ -0.97
CNOT9-202ENST00000295701 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9□□□□□ -0.971e-9■■■□□ 17.4
CNOT9-202ENST00000295701 RSPH14Q9UHP6 348 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 LCMT1Q9UIC8 334 aa9□□□□□ -0.97
CNOT9-202ENST00000295701 ERRFI1Q9UJM3 462 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms