RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CMPK2Q5EBM0 449 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 MMAAQ8IVH4 418 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 MINDY1Q8N5J2 469 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SPDL1Q96EA4 605 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 NAF1Q96HR8 494 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PPP1R16AQ96I34 528 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PPP3R2Q96LZ3 170 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 C1orf50Q9BV19 199 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 EPHX3Q9H6B9 360 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PRSS16Q9NQE7 514 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 HEBP1Q9NRV9 189 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 GID8Q9NWU2 228 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 KLQ9UEF7 1012 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ZNHIT2Q9UHR6 403 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 FAM234BA2RU67 622 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PABPN1LA6NDY0 278 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 C9JVG2 144 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 MANBAO00462 879 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 FFAR3O14843 346 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 GPR42O15529 346 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 MAP3K7O43318 606 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 RGS14O43566 566 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 TSPAN6O43657 245 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 LZTS3O60299 673 aaPredicted RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 MMP20O60882 483 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ATG13O75143 517 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ULK1O75385 1050 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PSIP1O75475 530 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 KAT7O95251 611 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 CLDN9O95484 217 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SOD1P00441 154 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PSMC3P17980 439 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 TCN1P20061 433 aaPredicted RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 IL12AP29459 219 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 EIF2DP41214 584 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 GRIA2P42262 883 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PRLHRP49683 370 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 POLR2JP52435 117 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 KCNK10P57789 538 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 DPTQ07507 201 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 TRAP1Q12931 704 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 NR6A1Q15406 480 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 MUM1Q2TAK8 710 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PTCHD3Q3KNS1 767 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 RFTN2Q52LD8 501 aaPredicted RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SAMD4BQ5PRF9 694 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ATAT1Q5SQI0 421 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 IL23RQ5VWK5 629 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ERN2Q76MJ5 926 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 LRRC70Q7Z2Q7 622 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 DSG4Q86SJ6 1040 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 FAM156AQ8NDB6 213 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 PROKR1Q8TCW9 393 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ELSPBP1Q96BH3 223 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 CHFRQ96EP1 664 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 HBEGFQ99075 208 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 HDAC8Q9BY41 377 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SLC29A3Q9BZD2 475 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SPAG4Q9NPE6 437 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 DYRK4Q9NR20 520 aa9.37□□□□□ -0.91
TRIM55-201ENST00000276573 FARSBQ9NSD9 589 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 SUCOQ9UBS9 1254 aaKnown RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 ZNF490Q9ULM2 529 aaPredicted RBP9.37□□□□□ -0.91
TRIM55-201ENST00000276573 MUC22E2RYF6 1773 aaPredicted RBP9.36□□□□□ -0.91
TRIM55-201ENST00000276573 PRORSD1PA6NEY8 169 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 C1QTNF3-AMACRE9PGA6 284 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 EPHX1P07099 455 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 C6P13671 934 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 SLC2A4P14672 509 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 ATP6V1C1P21283 382 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 GPR1P46091 355 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 RCAN2Q14206 197 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 TLR1Q15399 786 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 PRMT9Q6P2P2 845 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 NEK5Q6P3R8 708 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 DHDDSQ86SQ9 333 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 BHLHE22Q8NFJ8 381 aaPredicted RBP9.36□□□□□ -0.91
TRIM55-201ENST00000276573 GLMNQ92990 594 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 USP7Q93009 1102 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 TMEM159Q96B96 161 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 FBXL8Q96CD0 374 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 ASB9Q96DX5 294 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 NUS1Q96E22 293 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 RSRC1Q96IZ7 334 aaKnown RBP9.36□□□□□ -0.91
TRIM55-201ENST00000276573 SLC45A3Q96JT2 553 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 KXD1Q9BQD3 176 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 ACTR8Q9H981 624 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 IL1RL2Q9HB29 575 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 ZDHHC4Q9NPG8 344 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 DNAJC11Q9NVH1 559 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 FAM8A1Q9UBU6 413 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 PSMD13Q9UNM6 376 aa9.36□□□□□ -0.91
TRIM55-201ENST00000276573 KIF26AQ9ULI4 1882 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ASPDHA6ND91 283 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 CCDC154A6NI56 674 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 K7ESM1 405 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms