RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 EFNA1P20827 205 aaPredicted RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 IGFBP6P24592 240 aaPredicted RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 CDC20Q12834 499 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 TSNQ15631 228 aaKnown RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 TIGD6Q17RP2 521 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 ZNF181Q2M3W8 571 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 C18orf21Q32NC0 220 aaPredicted RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 RUNDC3AQ59EK9 446 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 CEP68Q76N32 757 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 AMIGO1Q86WK6 493 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 BEST2Q8NFU1 509 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 BLOC1S5Q8TDH9 187 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 BRI3BPQ8WY22 251 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 EVPLQ92817 2033 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 MTFMTQ96DP5 389 aaKnown RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 SLC7A5P2Q9GIP4 190 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 SCN1AP35498 2009 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 MCM3APO60318 1980 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 SOCS7O14512 581 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 HAT1O14929 419 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 TLL1O43897 1013 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 CNPP09543 421 aaKnown RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 KRT20P35900 424 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 OR3A3P47888 321 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 SNX16P57768 344 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 CHRNEQ04844 493 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 MBTD1Q05BQ5 628 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 BRMS1LQ5PSV4 323 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 IL27RAQ6UWB1 636 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 PROSER1Q86XN7 944 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 RAB43Q86YS6 212 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 CACTIN-AS1Q8N1I8 211 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 FBXO39Q8N4B4 442 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 ATPAF2Q8N5M1 289 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 EGLN2Q96KS0 407 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 ZSCAN5AQ9BUG6 496 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 UCK2Q9BZX2 261 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 MAGEL2Q9UJ55 1249 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 STAP1Q9ULZ2 295 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 GOLGA4Q13439 2230 aaKnown RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 KIAA1217Q5T5P2 1943 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 CDC7O00311 574 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 FKBP9O95302 570 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 PGRP06401 933 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 CCNYL3P0C7X3 344 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 SMPD1P17405 629 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 SLC26A3P40879 764 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 HTR6P50406 440 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 ARHGAP1Q07960 439 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 DMC1Q14565 340 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 ANKK1Q8NFD2 765 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 WNT8BQ93098 351 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 MCMBPQ9BTE3 642 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 UGT2B28Q9BY64 529 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 NXF3Q9H4D5 531 aaKnown RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 MPP6Q9NZW5 540 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 PABPN1LA6NDY0 278 aaKnown RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 GJB3O75712 270 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 PTTG1O95997 202 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 CREMQ03060 361 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 PRKG2Q13237 762 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 OTUD1Q5VV17 481 aaPredicted RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 TTC29Q8NA56 475 aaPredicted RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 C2CD4AQ8NCU7 369 aaPredicted RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 CENPIQ92674 756 aaPredicted RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 KCNC2Q96PR1 638 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 COPS4Q9BT78 406 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 WDCPQ9H6R7 721 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 ABCB9Q9NP78 766 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 NT5MQ9NPB1 228 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 NDFIP2Q9NV92 336 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 PDP1Q9P0J1 537 aaPredicted RBP12.59□□□□□ -0.39
HERC6-202ENST00000273960 MALT1Q9UDY8 824 aa12.59□□□□□ -0.39
HERC6-202ENST00000273960 METTL15A6NJ78 407 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 EVPLLA8MZ36 301 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 DSCR3O14972 297 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 C22orf31O95567 290 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 SLC2A4P14672 509 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 EDNRBP24530 442 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 CCR1P32246 355 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 PTGS2P35354 604 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 EEFSECP57772 596 aaKnown RBP12.58□□□□□ -0.39
HERC6-202ENST00000273960 TOP3AQ13472 1001 aaPredicted RBP12.58□□□□□ -0.39
HERC6-202ENST00000273960 CCL14Q16627 93 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 CYP27C1Q4G0S4 372 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 PLPPR4Q7Z2D5 763 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 VANGL1Q8TAA9 524 aaPredicted RBP12.58□□□□□ -0.39
HERC6-202ENST00000273960 CYP2S1Q96SQ9 504 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 ASB1Q9Y576 335 aa12.58□□□□□ -0.39
HERC6-202ENST00000273960 MEIOCA2RUB1 952 aa12.58□□□□□ -0.4
HERC6-202ENST00000273960 ZBTB42B2RXF5 422 aa12.58□□□□□ -0.4
HERC6-202ENST00000273960 H3BM21 787 aa12.58□□□□□ -0.4
HERC6-202ENST00000273960 CA5AP35218 305 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms