RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NXNQ6DKJ4 435 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 LRRC70Q7Z2Q7 622 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 OXR1Q8N573 874 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 KLK6Q92876 244 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 DPEP2Q9H4A9 486 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 SLC32A1Q9H598 525 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 IPPKQ9H8X2 491 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 FAM8A1Q9UBU6 413 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3DA0A087WVF3 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3IA0A087WXS9 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3EA0A087X179 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3KA0A087X1G2 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3FA6NER0 549 aaPredicted RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3LB9A6J9 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 CCNT2O60583 730 aaKnown RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 CATP04040 527 aaKnown RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3HP0C7X1 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 CHRNB1P11230 501 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 ACADMP11310 421 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 IGFALSP35858 605 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 KCNJ2P63252 427 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 RPA4Q13156 261 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3GQ6DHY5 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3CQ6IPX1 549 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 CRTC3Q6UUV7 619 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 KIAA1324Q6UXG2 1013 aaKnown RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 ZNF852Q6ZMS4 543 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 LRRTM4Q86VH4 590 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 KLHDC8AQ8IYD2 350 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D3Q8IZP1 549 aaPredicted RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 KIF2BQ8N4N8 673 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 CCT7Q99832 543 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 NTMT1Q9BV86 223 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 PHPT1Q9NRX4 125 aaPredicted RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 MRGBPQ9NV56 204 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 NDRG2Q9UN36 371 aaKnown RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 TIMM22Q9Y584 194 aa15.98■□□□□ 0.15
TPM1-201ENST00000267996 ZFC3H1O60293 1989 aaKnown RBP15.98■□□□□ 0.15
TPM1-201ENST00000267996 TCRBV21S2A2A0A5A6 115 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 PRR23AA6NEV1 266 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 CHURC1-FNTBB4DL54 471 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 CRCPO75575 148 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 MYCLP1P12525 358 aaPredicted RBP15.97■□□□□ 0.15
TPM1-201ENST00000267996 IL9P15248 144 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 EPB42P16452 691 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 EPORP19235 508 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 ACADLP28330 430 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 MAGEA9P43362 315 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 TPMTP51580 245 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 CCNG1P51959 295 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 PPP2CBP62714 309 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 PPP2CAP67775 309 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 XKR7Q5GH72 579 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 DOK6Q6PKX4 331 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 TRIM69Q86WT6 500 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 OR4F6Q8NGB9 312 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 FOXJ1Q92949 421 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 CCDC138Q96M89 665 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 FOPNLQ96NB1 174 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 CATSPER2Q96P56 530 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 BTBD10Q9BSF8 475 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 AKTIPQ9H8T0 292 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 OR1A2Q9Y585 309 aa15.97■□□□□ 0.15
TPM1-201ENST00000267996 COPG1Q9Y678 874 aaKnown RBP15.97■□□□□ 0.15
TPM1-201ENST00000267996 KLHL33A6NCF5 533 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 PABPN1LA6NDY0 278 aaKnown RBP15.96■□□□□ 0.15
TPM1-201ENST00000267996 VPS4BO75351 444 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 C1orf105O95561 183 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 CHEK2O96017 543 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 HOXC4P09017 264 aaPredicted RBP15.96■□□□□ 0.15
TPM1-201ENST00000267996 PRR35P0CG20 571 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 MAP4P27816 1152 aaKnown RBP15.96■□□□□ 0.15
TPM1-201ENST00000267996 PRKCQQ04759 706 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 NFE2L1Q14494 772 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 PTCHD3Q3KNS1 767 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 FAM83HQ6ZRV2 1179 aaPredicted RBP15.96■□□□□ 0.15
TPM1-201ENST00000267996 RINLQ6ZS11 566 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 Q6ZS52 159 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 RNF165Q6ZSG1 346 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 MILR1Q7Z6M3 343 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 AMZ2Q86W34 360 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 HOMEZQ8IX15 550 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 SYNPOQ8N3V7 929 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 CDYL2Q8N8U2 506 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 DENND6BQ8NEG7 585 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 CFAP61Q8NHU2 1237 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 CMTM5Q96DZ9 223 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 CDK15Q96Q40 435 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 MIPEPQ99797 713 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 TBC1D10AQ9BXI6 508 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 OR52A5Q9H2C5 316 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 CD93Q9NPY3 652 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 PFDN4Q9NQP4 134 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 ITM2CQ9NQX7 267 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 TAS2R1Q9NYW7 299 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 USP36Q9P275 1121 aaKnown RBP15.96■□□□□ 0.15
TPM1-201ENST00000267996 SLC23A2Q9UGH3 650 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 PRDM4Q9UKN5 801 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 ANGPTL3Q9Y5C1 460 aa15.96■□□□□ 0.15
TPM1-201ENST00000267996 PTGDR2Q9Y5Y4 395 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms