RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 MYF6P23409 242 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 FMO3P31513 532 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 GALNT2Q10471 571 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 CPSF6Q16630 551 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 CYP2A13Q16696 494 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 ZNF544Q6NX49 715 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 STON2Q8WXE9 905 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 NCSTNQ92542 709 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 COG8Q96MW5 612 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 PANX1Q96RD7 426 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 MAGEE1Q9HCI5 957 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 TMLHEQ9NVH6 421 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 SPATA7Q9P0W8 599 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 PEX16Q9Y5Y5 336 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 LCTP09848 1927 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 PRSS51A0A1B0GVH4 220 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 FAM234BA2RU67 622 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 IGHA2P01877 340 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 ITGB1P05556 798 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 GRIA2P42262 883 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 MAPK8P45983 427 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 BMXP51813 675 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 SYT16Q17RD7 645 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 GPRIN1Q7Z2K8 1008 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 TMEM135Q86UB9 458 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 DENND1CQ8IV53 801 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 CFAP52Q8N1V2 620 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 ESAMQ96AP7 390 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 ITCHQ96J02 903 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 FCRL5Q96RD9 977 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 C2orf49Q9BVC5 232 aaPredicted RBP11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 SLC25A51Q9H1U9 297 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 TPK1Q9H3S4 243 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 RPF2Q9H7B2 306 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 TRIM45Q9H8W5 580 aaPredicted RBP11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 ARL15Q9NXU5 204 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 ADAM30Q9UKF2 790 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 ERGIC3Q9Y282 383 aa11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 HEMK1Q9Y5R4 338 aaPredicted RBP11.34□□□□□ -0.59
CLSTN3-201ENST00000266546 HTR3EA5X5Y0 456 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 IFRD1O00458 451 aaPredicted RBP11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CXCR6O00574 342 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 PCSK6P29122 969 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 ITGA1P56199 1179 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 ERVK-8P63133 956 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 BNC1Q01954 994 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 ACSM2AQ08AH3 577 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 ACSM2BQ68CK6 577 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 MZT2BQ6NZ67 158 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 DCDC5Q6ZRR9 648 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 DET1Q7L5Y6 550 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 OR5K1Q8NHB7 308 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 SUN5Q8TC36 379 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 NSMCE3Q96MG7 304 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 GPR21Q99679 349 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 NUSAP1Q9BXS6 441 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CLEC4MQ9H2X3 399 aaPredicted RBP11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 TOR3AQ9H497 397 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 SLC2A6Q9UGQ3 507 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 GRID2O43424 1007 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 RPP40O75818 363 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 SLC35E2BP0CK96 405 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 ACRP10323 421 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 GABRR2P28476 465 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 GNPDA1P46926 289 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 DNAJB13P59910 316 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 PHC1P78364 1004 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 IL10RBQ08334 325 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 SLC15A3Q8IY34 581 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 TTC29Q8NA56 475 aaPredicted RBP11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 SH3KBP1Q96B97 665 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 VPS35Q96QK1 796 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 DCSTAMPQ9H295 470 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CLN6Q9NWW5 311 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 PIPSLA2A3N6 862 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 KRT87PA6NCN2 255 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 TCAF2A6NFQ2 919 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 H0YAE9 185 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 AP1G1O43747 822 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 LRATO95237 230 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 TSPAN19P0C672 248 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CSF2RAP15509 400 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 RPL17P18621 184 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 MYL12AP19105 171 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 DGKAP23743 735 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 HOXD12P35452 270 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 PBX3P40426 434 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 PLET1Q6UQ28 207 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CYP4Z1Q86W10 505 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 ZDHHC21Q8IVQ6 265 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 B3GALT6Q96L58 329 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 TSSK3Q96PN8 268 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 TSGA13Q96PP4 275 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 C11orf84Q9BUA3 381 aaPredicted RBP11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CIPCQ9C0C6 399 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
CLSTN3-201ENST00000266546 CARD8Q9Y2G2 431 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms