RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 RGS21Q2M5E4 152 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 PDCD4Q53EL6 469 aaKnown RBP16.47■□□□□ 0.23
SQLE-201ENST00000265896 SBSNQ6UWP8 590 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 DSG4Q86SJ6 1040 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 RGL4Q8IZJ4 473 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 TRIB2Q92519 343 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 TAMM41Q96BW9 452 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 ULK4Q96C45 1275 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 PCDHB8Q9UN66 801 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 PCDHB14Q9Y5E9 798 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 DOCK4Q8N1I0 1966 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 RANBP2P49792 3224 aaKnown RBP16.47■□□□□ 0.23
SQLE-201ENST00000265896 LOC100130705A0A1B0GUX0 176 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 AREL1O15033 823 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 TAPBPO15533 448 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 PGRP06401 933 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 BCAP31P51572 246 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 GP2P55259 537 aaKnown RBP16.47■□□□□ 0.23
SQLE-201ENST00000265896 DDX39BQ13838 428 aaKnown RBP16.47■□□□□ 0.23
SQLE-201ENST00000265896 PON2Q15165 354 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 RFLNAQ6ZTI6 216 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 CEP68Q76N32 757 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 PROSER1Q86XN7 944 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 ALDH16A1Q8IZ83 802 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 NEURL2Q9BR09 285 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 SNX5Q9Y5X3 404 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 SEC14L2O76054 403 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 CDH3P22223 829 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 FOXM1Q08050 763 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 PWP1Q13610 501 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 TAF1AQ15573 450 aaPredicted RBP16.47■□□□□ 0.23
SQLE-201ENST00000265896 MOGQ16653 247 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 ZIM2Q9NZV7 527 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 ABCG2Q9UNQ0 655 aa16.47■□□□□ 0.23
SQLE-201ENST00000265896 ELOVL7A1L3X0 281 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 ANKRD28O15084 1053 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 VPS4BO75351 444 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 MTX2O75431 263 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 PRAMEF1O95521 474 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 CCND3P30281 292 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 HOXC8P31273 242 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 CLCN7P51798 805 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 TRAF3Q13114 568 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 SYT16Q17RD7 645 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 CYP27C1Q4G0S4 372 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 SLC16A12Q6ZSM3 486 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 SERPINA9Q86WD7 417 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 ZNF420Q8TAQ5 688 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 MCOLN3Q8TDD5 553 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 PSKH2Q96QS6 385 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 NODALQ96S42 347 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 MGME1Q9BQP7 344 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 TNKS2Q9H2K2 1166 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 ASB8Q9H765 288 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 GPRC5BQ9NZH0 403 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 TRIM43BA6NCK2 446 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 TRIM64A6NGJ6 449 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 DRGXA6NNA5 263 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 SLC1A7O00341 560 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 ZNF623O75123 536 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 CORO1AP31146 461 aaKnown RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 DCTP40126 519 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 EMX1Q04741 257 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 MBTPS1Q14703 1052 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 LSRQ86X29 649 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 ZBTB8BQ8NAP8 495 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 PAPD5Q8NDF8 572 aaKnown RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 ZNF548Q8NEK5 533 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 NRBF2Q96F24 287 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 ZNF382Q96SR6 550 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 DOK1Q99704 481 aa16.46■□□□□ 0.23
SQLE-201ENST00000265896 MBD1Q9UIS9 605 aaPredicted RBP16.46■□□□□ 0.23
SQLE-201ENST00000265896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.46■□□□□ 0.23
SQLE-201ENST00000265896 MTMR11A4FU01 709 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 M0R129 80 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 VNN2O95498 520 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 NADKO95544 446 aaPredicted RBP16.45■□□□□ 0.22
SQLE-201ENST00000265896 UMPSP11172 480 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 HTR7P34969 479 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 MASP1P48740 699 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 TTPAP49638 278 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 ZNF157P51786 506 aaPredicted RBP16.45■□□□□ 0.22
SQLE-201ENST00000265896 CARD16Q5EG05 197 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 GTF2IRD2BQ6EKJ0 949 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 GTF2IRD2Q86UP8 949 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 C2orf69Q8N8R5 385 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 LINC01599Q8WXQ3 324 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 MYO7AQ13402 2215 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 FAM92AA1XBS5 289 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 C2orf78A6NCI8 922 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
SQLE-201ENST00000265896 ULK1O75385 1050 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 CLDN7O95471 211 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 CPNE6O95741 557 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 S100BP04271 92 aaPredicted RBP16.45■□□□□ 0.22
SQLE-201ENST00000265896 ABCB1P08183 1280 aaPredicted RBP16.45■□□□□ 0.22
SQLE-201ENST00000265896 ATF6P18850 670 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 ARF5P84085 180 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 BEND5Q7L4P6 421 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms