RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RHEBL1Q8TAI7 183 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CKAP2Q8WWK9 683 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ZC3H10Q96K80 434 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CAPS2Q9BXY5 557 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 NCKIPSDQ9NZQ3 722 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PLAGL1Q9UM63 463 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ASB1Q9Y576 335 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 SNX11Q9Y5W9 270 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 A0A1B0GTW7 788 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 EIF3FO00303 357 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 TAPBPO15533 448 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 SDC3O75056 442 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PSIP1O75475 530 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 LYPLA1O75608 230 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CACNA1HO95180 2353 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 SIX3O95343 332 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 C1orf105O95561 183 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CSF2P04141 144 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GSTM1P09488 218 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CTSEP14091 401 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GFAPP14136 432 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 VCLP18206 1134 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 TSPAN8P19075 237 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 TAC1P20366 129 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 IDSP22304 550 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ATP5F1P24539 256 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ARRB2P32121 409 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 RPIAP49247 311 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GNGT1P63211 74 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 IL9RQ01113 521 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GSTM4Q03013 218 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ZXDCQ2QGD7 858 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CAPRIN2Q6IMN6 1127 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GPR179Q6PRD1 2367 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 NEK10Q6ZWH5 1172 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 FRA10AC1Q70Z53 315 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 TAF8Q7Z7C8 310 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ADAMTSL2Q86TH1 951 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PDZD3Q86UT5 571 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 DCP2Q8IU60 420 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 RASGRP3Q8IV61 690 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CCNYL1Q8N7R7 359 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PTGR2Q8N8N7 351 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 FAM174AQ8TBP5 190 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GPBAR1Q8TDU6 330 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PATE1Q8WXA2 126 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ZNF75CPQ92670 426 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 TFGQ92734 400 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 C12orf66Q96MD2 445 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 LRRC61Q9BV99 259 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GATA5Q9BWX5 397 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC12A9Q9BXP2 914 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 DPEP2Q9H4A9 486 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 SMOC1Q9H4F8 434 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 RABEP2Q9H5N1 569 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 MANSC1Q9H8J5 431 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PARVBQ9HBI1 364 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 OXSMQ9NWU1 459 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 TRNAU1APQ9NX07 287 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 SIRPGQ9P1W8 387 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 APOBEC3BQ9UH17 382 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ACSL5Q9ULC5 683 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 OARD1Q9Y530 152 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 VPS13AQ96RL7 3174 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 TCP11X1B4DZS4 312 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 BIRC5O15392 142 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 FFAR2O15552 330 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 ITM2AO43736 263 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 TRIM13O60858 407 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 SMIM24O75264 130 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 CFIP05156 583 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 C8GP07360 202 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC35G4P0C7Q5 338 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 TPBGLP0DKB5 382 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 NME1P15531 152 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 CNR2P34972 360 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 GDF5P43026 501 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 SEC24CP53992 1094 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 NAGLUP54802 743 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 SF3A3Q12874 501 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 OVGP1Q12889 678 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 ILF3Q12906 894 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 BNIP3Q12983 259 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 RPA4Q13156 261 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 RPE65Q16518 533 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 PDK4Q16654 411 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 C11orf74Q86VG3 221 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 SYT12Q8IV01 421 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 FBXO39Q8N4B4 442 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 RDH11Q8TC12 318 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 LMX1AQ8TE12 382 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 JPH3Q8WXH2 748 aaPredicted RBP9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 MAGEB18Q96M61 343 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 NSUN5Q96P11 429 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 TMEM237Q96Q45 408 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 FERD3LQ96RJ6 166 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 PKP4Q99569 1192 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 EGFL8Q99944 293 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms