RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ZNF225Q9UK10 706 aa22.35■■□□□ 1.17
SMARCB1-201ENST00000263121 PABPN1LA6NDY0 278 aaKnown RBP22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 TRPC5OSA6NMA1 111 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 ZNF217O75362 1048 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 ESRRBO95718 433 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 ACADLP28330 430 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 CD6P30203 668 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 PFN3P60673 137 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 DMPKQ09013 629 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 LACTB2Q53H82 288 aaPredicted RBP22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 SPDYAQ5MJ70 313 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 KANK2Q63ZY3 851 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 CLEC6AQ6EIG7 209 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 GCNT7Q6ZNI0 430 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 CLNKQ7Z7G1 428 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 SYVN1Q86TM6 617 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 SPEM1Q8N4L4 309 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 FBXL8Q96CD0 374 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 NMUR2Q9GZQ4 415 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 OPTCQ9UBM4 332 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 CA5BQ9Y2D0 317 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 FIS1Q9Y3D6 152 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 ZFC3H1O60293 1989 aaKnown RBP22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 TRIOO75962 3097 aa22.34■■□□□ 1.17
SMARCB1-201ENST00000263121 K7EPI3 171 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 FCHO1O14526 889 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 AZIN1O14977 448 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 CCNT2O60583 730 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 STK16O75716 305 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 C1orf105O95561 183 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 MAP4P27816 1152 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 PRDX3P30048 256 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 AKT2P31751 481 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 GDF5P43026 501 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 RPS9P46781 194 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 SLC6A12P48065 614 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 INHBCP55103 352 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 PKNOX1P55347 436 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 BTKQ06187 659 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 RBBP7Q16576 425 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 SPRED3Q2MJR0 410 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 METRNLQ641Q3 311 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 TEX9Q8N6V9 391 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 TMEM145Q8NBT3 493 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 MAELQ96JY0 434 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 OR52B2Q96RD2 323 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 TIMM29Q9BSF4 260 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 NOL11Q9H8H0 719 aaKnown RBP22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 KLC4Q9NSK0 619 aa22.33■■□□□ 1.17
SMARCB1-201ENST00000263121 KRT87PA6NCN2 255 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 H0Y8X5 98 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 OR7A17O14581 309 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 CCDC22O60826 627 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 APBB3O95704 486 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 SERPINA6P08185 405 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 BDKRB1P46663 353 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 FOXA1P55317 472 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 NFATC4Q14934 902 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 PYCR3Q53H96 274 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 FAM219BQ5XKK7 198 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 FAM91A1Q658Y4 838 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 GPRIN3Q6ZVF9 776 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 PDZD3Q86UT5 571 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 OR52B6Q8NGF0 335 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 PRR11Q96HE9 360 aaPredicted RBP22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 TPSD1Q9BZJ3 242 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 WDR55Q9H6Y2 383 aaPredicted RBP22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 MEAF6Q9HAF1 191 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 TCF7L2Q9NQB0 619 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 MUTYHQ9UIF7 546 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 SUFUQ9UMX1 484 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 STK38LQ9Y2H1 464 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 HS3ST3A1Q9Y663 406 aa22.33■■□□□ 1.16
SMARCB1-201ENST00000263121 IGHV1OR15-9A0A0B4J2B8 117 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 PRR19A6NJB7 356 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 SDHDO14521 159 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 SKAP2O75563 359 aaPredicted RBP22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 CCSMST1Q4G0I0 132 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 UNC5DQ6UXZ4 953 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 LRRC70Q7Z2Q7 622 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 GALNT13Q8IUC8 556 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 CCDC138Q96M89 665 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 KCNA7Q96RP8 456 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 UHRF1Q96T88 793 aaPredicted RBP22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 CCDC28BQ9BUN5 200 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 GPR174Q9BXC1 333 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 ZDHHC5Q9C0B5 715 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 SLC32A1Q9H598 525 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 FGF22Q9HCT0 170 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 MRPL40Q9NQ50 206 aaKnown RBP22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 DNAJC15Q9Y5T4 150 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 ST14Q9Y5Y6 855 aa22.32■■□□□ 1.16
SMARCB1-201ENST00000263121 FSBPO95073 299 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 EPHA3P29320 983 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 PIK3CGP48736 1102 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 ERVPABLB-1P60509 514 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 BNIP1Q12981 228 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 TRAF3Q13114 568 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 CHST15Q7LFX5 561 aaPredicted RBP22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 GJD3Q8N144 294 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms