RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
TTC39A-202ENST00000262676 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-202ENST00000262676 RICTORQ6R327 1708 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 PDPK1O15530 556 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 NUAK1O60285 661 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 THEGLP0DJG4 465 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 KELP23276 732 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 AHCYP23526 432 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 SLC25A25Q6KCM7 469 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 FSTL5Q8N475 847 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF784Q8NCA9 323 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 FAM13CQ8NE31 585 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 LGMNQ99538 433 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 SMURF1Q9HCE7 757 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 TVP23BQ9NYZ1 205 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 OAZ2O95190 189 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ABHD2P08910 425 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF823P16415 610 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 LPOP22079 712 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ASMTP46597 345 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 VWA5B1Q5TIE3 1220 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 MAP4K3Q8IVH8 894 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 OR4C6Q8NH72 309 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 TMEM134Q9H6X4 195 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 PDE10AQ9Y233 779 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 A0A1W2PRU2 124 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 MAP2K7O14733 419 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ITGAVP06756 1048 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 SLC2A2P11168 524 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 AAK1Q2M2I8 961 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 FBXO48Q5FWF7 155 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 BRMS1LQ5PSV4 323 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 SDR16C5Q8N3Y7 309 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 PIWIL1Q96J94 861 aaKnown RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 EBPLQ9BY08 206 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 DPEP2Q9H4A9 486 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 RNF121Q9H920 327 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF878C9JN71 531 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 GADD45AP24522 165 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 MAPK12P53778 367 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ATP6V0D1P61421 351 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 FOXM1Q08050 763 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 HSPB3Q12988 150 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 CLEC6AQ6EIG7 209 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 RBM15BQ8NDT2 890 aaKnown RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 BPIFB1Q8TDL5 484 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ACOT12Q8WYK0 555 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 HCN3Q9P1Z3 774 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 PCYOX1Q9UHG3 505 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 MRPS33Q9Y291 106 aaKnown RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 OR6C75A6NL08 312 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 NME6O75414 186 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 IFNW1P05000 195 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 MAPTP10636 758 aaKnown RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 CSF2RAP15509 400 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 PGDP52209 483 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 RFWD3Q6PCD5 774 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 MPP5Q8N3R9 675 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 RNF157Q96PX1 679 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF649Q9BS31 505 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-202ENST00000262676 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF99A8MXY4 864 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 MEN1O00255 615 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 MPZL2O60487 215 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF12P17014 697 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CORO1AP31146 461 aaKnown RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 GRM2Q14416 872 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 AMZ1Q400G9 498 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 BEND4Q6ZU67 534 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 HCAR2Q8TDS4 363 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 MFSD14AQ96MC6 490 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 WRAP53Q9BUR4 548 aaKnown RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 NKX2-4Q9H2Z4 354 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 BPGMP07738 259 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CYP3A4P08684 503 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 EFNA1P20827 205 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 XKR4Q5GH76 650 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 RNASEH2BQ5TBB1 312 aaKnown RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 HAGHLQ6PII5 290 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ANKS1BQ7Z6G8 1248 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CCDC107Q8WV48 283 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 C12orf43Q96C57 262 aaKnown RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 TAPBPLQ9BX59 468 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 POLR3BQ9NW08 1133 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 RIMKLBQ9ULI2 386 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 TCRBV9S1A1TA0A576 114 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CPED1A4D0V7 1026 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 EDF1O60869 148 aaKnown RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 TULP3O75386 442 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF20P17024 532 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 OGNP20774 298 aaKnown RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ARFRP1Q13795 201 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 NTRK3Q16288 839 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms