RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KIAA1143Q96AT1 154 aaPredicted RBP13.06□□□□□ -0.32
SGCA-201ENST00000262018 ZNF641Q96N77 438 aaPredicted RBP13.06□□□□□ -0.32
SGCA-201ENST00000262018 SRPK1Q96SB4 655 aaKnown RBP13.06□□□□□ -0.32
SGCA-201ENST00000262018 PLCD4Q9BRC7 762 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ADGRE3Q9BY15 652 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 RHOJQ9H4E5 214 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 MBNL1Q9NR56 388 aaKnown RBP13.06□□□□□ -0.32
SGCA-201ENST00000262018 SLC17A7Q9P2U7 560 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 LRIT1Q9P2V4 623 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 PLLPQ9Y342 182 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ESPL1Q14674 2120 aa13.06□□□□□ -0.32
SGCA-201ENST00000262018 ANKRD66B4E2M5 251 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 HTRA2O43464 458 aaPredicted RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 SOCS5O75159 536 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 AHSGP02765 367 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 UGT2B4P06133 528 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 PDHA1P08559 390 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 PNLIPP16233 465 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 GABRB3P28472 473 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 FOXN2P32314 431 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 CCT5P48643 541 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 BCL2L1Q07817 233 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 TAF1AQ15573 450 aaPredicted RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 SEPT7Q16181 437 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 PDK4Q16654 411 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 QPCTQ16769 361 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 C1QL3Q5VWW1 255 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ENPP7Q6UWV6 458 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 CDHR3Q6ZTQ4 885 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ASB18Q6ZVZ8 466 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ZC3HC1Q86WB0 502 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 SFTPA2Q8IWL1 248 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 LRRC34Q8IZ02 419 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 NDUFAF2Q8N183 169 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 LPCAT1Q8NF37 534 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 CPT1CQ8TCG5 803 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 HCAR2Q8TDS4 363 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 VOPP1Q96AW1 172 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 VPS39Q96JC1 886 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 GPR22Q99680 433 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 RABEP2Q9H5N1 569 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 SNX15Q9NRS6 342 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 PCMTD2Q9NV79 361 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 FBXO5Q9UKT4 447 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 GRID1Q9ULK0 1009 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 MTO1Q9Y2Z2 717 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 KCTD3Q9Y597 815 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 SPO11Q9Y5K1 396 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ARL5AQ9Y689 179 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 SETD2Q9BYW2 2564 aaPredicted RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 MKRN2OSH3BPM6 223 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 HGSO14964 777 aaPredicted RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 GLRA3O75311 464 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 PGLSO95336 258 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 PIGNO95427 931 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 CPNE6O95741 557 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 TAC1P20366 129 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 SLC1A2P43004 574 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ZNF140P52738 457 aaPredicted RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 HNRNPH2P55795 449 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 RPL26P61254 145 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 MPP1Q00013 466 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ILF2Q12905 390 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 CTBP1Q13363 440 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 INSCQ1MX18 579 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ATP1A1-AS1Q5TC04 95 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 TCTN3Q6NUS6 607 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 CAMK1DQ8IU85 385 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 DENND6AQ8IWF6 608 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 ANKS4BQ8N8V4 417 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 HDAC10Q969S8 669 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 RAB7BQ96AH8 199 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 DNAJC1Q96KC8 554 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 CABS1Q96KC9 395 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 KLHL32Q96NJ5 620 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 FAM111AQ96PZ2 611 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 PAIP2Q9BPZ3 127 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 NUDT22Q9BRQ3 303 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 IQCGQ9H095 443 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 VPS11Q9H270 941 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 SUV39H2Q9H5I1 410 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 NLE1Q9NVX2 485 aaPredicted RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 SLC39A1Q9NY26 324 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 HACD3Q9P035 362 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 DKK3Q9UBP4 350 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 DCDC2Q9UHG0 476 aa13.05□□□□□ -0.32
SGCA-201ENST00000262018 RPL26L1Q9UNX3 145 aaKnown RBP13.05□□□□□ -0.32
SGCA-201ENST00000262018 LOC101059948A0A1B0GTJ6 334 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 A0A1W2PQ67 120 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 TSPAN11A1L157 253 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 B4DGG1 531 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 TCP11X1B4DZS4 312 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
SGCA-201ENST00000262018 TOR1BO14657 336 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 B4GAT1O43505 415 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 MMP20O60882 483 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 F7P08709 466 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms