RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ASB9Q96DX5 294 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 HERPUD2Q9BSE4 406 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 C1QTNF1Q9BXJ1 281 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 IRF2BPLQ9H1B7 796 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MRPS30Q9NP92 439 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TAS2R14Q9NYV8 317 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RHPN2P1A8MT19 583 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PIRO00625 290 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TNFRSF10BO14763 440 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 KCNK5O95279 499 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PRAMEF12O95522 483 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CDH1P12830 882 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TNFSF9P41273 254 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RPS21P63220 83 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ROR2Q01974 943 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ARL6IP1Q15041 203 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 DCST1Q5T197 706 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 FBXW10Q5XX13 1052 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CES3Q6UWW8 571 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CLEC20AQ6ZU45 233 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 C10orf107Q8IVU9 208 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OSTF1Q92882 214 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 DEFB118Q96PH6 123 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SLC2A13Q96QE2 648 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TAPBPLQ9BX59 468 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ZCWPW1Q9H0M4 648 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 WDR26Q9H7D7 661 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 S100A14Q9HCY8 104 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SEMA4BQ9NPR2 832 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NLE1Q9NVX2 485 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OXSMQ9NWU1 459 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SMPD4Q9NXE4 827 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 IGKV6-21A0A0C4DH24 114 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 FAM170AA1A519 330 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NEDD8-MDP1E9PL57 170 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SLC28A2O43868 658 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TSPAN3O60637 253 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF217O75362 1048 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MATN4O95460 622 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 HPRP00739 348 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 LYNP07948 512 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PSMB9P28065 219 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OVGP1Q12889 678 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 GBX1Q14549 363 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MEDAGQ5VYS4 303 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 QSOX2Q6ZRP7 698 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 C12orf40Q86WS4 652 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ARMC8Q8IUR7 673 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SUN3Q8TAQ9 357 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 COQ6Q9Y2Z9 468 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MEMO1Q9Y316 297 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MAGED1Q9Y5V3 778 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 DHFRP00374 187 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 EPORP19235 508 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 GRIA3P42263 894 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SLC7A2P52569 658 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NIPAL4Q0D2K0 466 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CRHR2Q13324 411 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TYW3Q6IPR3 259 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 LAYNQ6UX15 382 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TMIEQ8NEW7 156 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 LCN9Q8WX39 176 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 FOXJ1Q92949 421 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MIEF2Q96C03 454 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 FBXO6Q9NRD1 293 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ARL8BQ9NVJ2 186 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 FLRT1Q9NZU1 646 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RBBP6Q7Z6E9 1792 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CCDC182A6NF36 153 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 WASHC1A8K0Z3 465 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 WASH3PC4AMC7 463 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 FADS2O95864 444 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ETV6P41212 452 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MFSD13AQ14CX5 517 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 DGKKQ5KSL6 1271 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 FSTL4Q6MZW2 842 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 WASH2PQ6VEQ5 465 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SLC36A4Q6YBV0 504 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF550Q7Z398 422 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CBARPQ8N350 705 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 UBR7Q8N806 425 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CCDC107Q8WV48 283 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TRMT2BQ96GJ1 504 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 G6PC3Q9BUM1 346 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RGPD4Q7Z3J3 1758 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 EP400Q96L91 3159 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3DA0A087WVF3 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3IA0A087WXS9 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3EA0A087X179 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3KA0A087X1G2 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3FA6NER0 549 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3LB9A6J9 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PPM1BO75688 479 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OAZ2O95190 189 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SLC10A3P09131 477 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3HP0C7X1 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RPS3P23396 243 aaKnown RBP eCLIP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SPIBQ01892 262 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 BNIP1Q12981 228 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NPY5RQ15761 445 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms