RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PRAMEF33A0A0G2JMD5 474 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 CPNE6O95741 557 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 S1PR4O95977 384 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 MTHFD1P11586 935 aaKnown RBP16.37■□□□□ 0.21
SDCBP-201ENST00000260130 PDHA2P29803 388 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 PREPP48147 710 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 EPHA4P54764 986 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 ADARP55265 1226 aaKnown RBP16.37■□□□□ 0.21
SDCBP-201ENST00000260130 CTBP1Q13363 440 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 SQSTM1Q13501 440 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 CAMK2BQ13554 666 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 CLPPQ16740 277 aaPredicted RBP16.37■□□□□ 0.21
SDCBP-201ENST00000260130 WLSQ5T9L3 541 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 NKAIN2Q5VXU1 208 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 CEP128Q6ZU80 1094 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 PIM3Q86V86 326 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 KCNMB4Q86W47 210 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 DENND6AQ8IWF6 608 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 CCDC63Q8NA47 563 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 OR10G6Q8NH81 332 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 AHCYL2Q96HN2 611 aaKnown RBP16.37■□□□□ 0.21
SDCBP-201ENST00000260130 BIRC8Q96P09 236 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 RDH14Q9HBH5 336 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 CRYL1Q9Y2S2 319 aa16.37■□□□□ 0.21
SDCBP-201ENST00000260130 IQCF5A8MTL0 148 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 ITGB6P18564 788 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 FMO4P31512 558 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 CCR7P32248 378 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 CD151P48509 253 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 ELF3P78545 371 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 PLOD1Q02809 727 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 BOP1Q14137 746 aaKnown RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 NAPRTQ6XQN6 538 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 UNC5AQ6ZN44 842 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 ANKMY2Q8IV38 441 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 GBP7Q8N8V2 638 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 FBXO36Q8NEA4 188 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 CFAP36Q96G28 342 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 RMDN2Q96LZ7 410 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 PANX3Q96QZ0 392 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 FAM167BQ9BTA0 163 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 TBC1D10AQ9BXI6 508 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 PLAC1Q9HBJ0 212 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 PCDHB1Q9Y5F3 818 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 PTPRBP23467 1997 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 SLC5A10A0PJK1 596 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 LILRA5A6NI73 299 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 ESR1P03372 595 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 ERVK-10P10266 1014 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 EZRP15311 586 aaKnown RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 PPM1FP49593 454 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 PDX1P52945 283 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 SYTL3Q4VX76 610 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 GABPB2Q8TAK5 448 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 LKAAEAR1Q8TD35 194 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 TMEM159Q96B96 161 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 CCDC77Q9BR77 488 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 IARS2Q9NSE4 1012 aaKnown RBP16.36■□□□□ 0.21
SDCBP-201ENST00000260130 FBXO5Q9UKT4 447 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 ENTPD2Q9Y5L3 495 aa16.36■□□□□ 0.21
SDCBP-201ENST00000260130 SLC1A2P43004 574 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 GPR18Q14330 331 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 FASTKD3Q14CZ7 662 aaKnown RBP16.35■□□□□ 0.21
SDCBP-201ENST00000260130 ZNF789Q5FWF6 425 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 CTSL3PQ5NE16 218 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 STEAP4Q687X5 459 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 TMPRSS9Q7Z410 1059 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 ZBED8Q8IZ13 594 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 ASZ1Q8WWH4 475 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 CERS2Q96G23 380 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 NUDT22Q9BRQ3 303 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 EPB41L1Q9H4G0 881 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 KCNK9Q9NPC2 374 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 HEBP2Q9Y5Z4 205 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 COLEC10Q9Y6Z7 277 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 AKAP13Q12802 2813 aa16.35■□□□□ 0.21
SDCBP-201ENST00000260130 TRABD2BA6NFA1 517 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 TCP11X1B4DZS4 312 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 H3BMM5 538 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 TMX2-CTNND1H3BSU7 103 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 DUX1O43812 170 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 KYNUQ16719 465 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 DUS1LQ6P1R4 473 aaKnown RBP16.34■□□□□ 0.21
SDCBP-201ENST00000260130 B3GNT8Q7Z7M8 397 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 MGARPQ8TDB4 240 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 ZFPM2Q8WW38 1151 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 CKAP2Q8WWK9 683 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 TMEM74Q96NL1 305 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 DPYSL5Q9BPU6 564 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 FOXP3Q9BZS1 431 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 FBXO6Q9NRD1 293 aaPredicted RBP16.34■□□□□ 0.21
SDCBP-201ENST00000260130 LGALS13Q9UHV8 139 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 KPNA5O15131 536 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 APOA4P06727 396 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 PKMP14618 531 aaKnown RBP16.34■□□□□ 0.21
SDCBP-201ENST00000260130 AOAHP28039 575 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 MAPK9P45984 424 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms