RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 DCDC2Q9UHG0 476 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 ASF1AQ9Y294 204 aa15.42■□□□□ 0.06
CCDC90B-201ENST00000260054 PRAMEF33A0A0G2JMD5 474 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 B4DGG1 531 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 PROB1E7EW31 1015 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 PSIP1O75475 530 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 GSTA1P08263 222 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 TGM1P22735 817 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 KCNC1P48547 511 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 CCT5P48643 541 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 PHKG1Q16816 387 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 PPP1R3AQ16821 1122 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 TSNAXIP1Q2TAA8 658 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SBSNQ6UWP8 590 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 LCA5Q86VQ0 697 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 PHC3Q8NDX5 983 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 OR5AR1Q8NGP9 310 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 TSNARE1Q96NA8 513 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 FOPNLQ96NB1 174 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 TFB2MQ9H5Q4 396 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 EMCNQ9ULC0 261 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 NEMP2A6NFY4 417 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 ARHGEF33A8MVX0 844 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 HMGB1P1B2RPK0 211 aaPredicted RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 PCDHGA12O60330 932 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 LRP3O75074 770 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 C1orf105O95561 183 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 C8GP07360 202 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 MTHFD1P11586 935 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SLC19A1P41440 591 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 BDKRB1P46663 353 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SP140Q13342 867 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 CSRP2Q16527 193 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 TECRLQ5HYJ1 363 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 C6orf132Q5T0Z8 1188 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 N4BP2L1Q5TBK1 243 aaPredicted RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 KLC3Q6P597 504 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 UNC5DQ6UXZ4 953 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 UBE2R2Q712K3 238 aaPredicted RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SFRP1Q8N474 314 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 TMEM151AQ8N4L1 468 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SLC37A2Q8TED4 501 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SCYL1Q96KG9 808 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SLC12A9Q9BXP2 914 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SSU72Q9NP77 194 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 SIRPGQ9P1W8 387 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 XPR1Q9UBH6 696 aa15.41■□□□□ 0.06
CCDC90B-201ENST00000260054 ARID1BQ8NFD5 2236 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 KIR2DS5A0A0G2JLQ3 304 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 A0A0G2JNG1 304 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 KRT87PA6NCN2 255 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 H3BQF6 201 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 KIR2DS3K7RE56 304 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 TK2O00142 265 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 CDX4O14627 284 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 NOBOXO60393 691 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 SBK3P0C264 359 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 MPP2Q14168 576 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 KIR2DS5Q14953 304 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 CCSMST1Q4G0I0 132 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 OGFOD3Q6PK18 319 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 ADAMTSL2Q86TH1 951 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 OR5K2Q8NHB8 316 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 RHEBL1Q8TAI7 183 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 TCP10LQ8TDR4 215 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 ATOH8Q96SQ7 321 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 MED4Q9NPJ6 270 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 DNAAF2Q9NVR5 837 aaKnown RBP15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 NLGN3Q9NZ94 848 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 CPSF2Q9P2I0 782 aaKnown RBP15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 SLC17A7Q9P2U7 560 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 RAPGEFL1Q9UHV5 662 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 GRID1Q9ULK0 1009 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 PDE10AQ9Y233 779 aa15.4■□□□□ 0.06
CCDC90B-201ENST00000260054 EP300Q09472 2414 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 OR5K4A6NMS3 321 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC16A5O15375 505 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 KERAO60938 352 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 CATP04040 527 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 RBP1P09455 135 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 ZNF883P0CG24 379 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC2A4P14672 509 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 XRCC1P18887 633 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 RPA3P35244 121 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 MAPK9P45984 424 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 MAZP56270 477 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 UBE2IP63279 158 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 NHLH1Q02575 133 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 HSP90B2PQ58FF3 399 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 C17orf82Q86X59 251 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 TBC1D21Q8IYX1 336 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 GPR156Q8NFN8 814 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 OR4C6Q8NH72 309 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 STAG3L4Q8TBR4 150 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 CXorf40BQ96DE9 158 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 FERD3LQ96RJ6 166 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 MRPL57Q9BQC6 102 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 EDEM2Q9BV94 578 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 PARVBQ9HBI1 364 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms