RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 FAM234BA2RU67 622 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CTDSP2O14595 271 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 ACOX3O15254 700 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 UPK1BO75841 260 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 AP2A2O94973 939 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 FHP07954 510 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 OR4Q2P0C623 313 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 UROSP10746 265 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 AXLP30530 894 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 SOAT1P35610 550 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CTU2Q2VPK5 515 aaKnown RBP12.11□□□□□ -0.47
USP30-201ENST00000257548 SYVN1Q86TM6 617 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 OR5K1Q8NHB7 308 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 PCNPQ8WW12 178 aaKnown RBP12.11□□□□□ -0.47
USP30-201ENST00000257548 APOLD1Q96LR9 279 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 IL4I1Q96RQ9 567 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 PRG3Q9Y2Y8 225 aaPredicted RBP12.11□□□□□ -0.47
USP30-201ENST00000257548 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 C12orf71A8MTZ7 269 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 BTN3A3O00478 584 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 MATN3O15232 486 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CCNYL3P0C7X3 344 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 PFKLP17858 780 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CYP2C18P33260 490 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 PPP3CCP48454 512 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 ZNF284Q2VY69 593 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 DCLRE1AQ6PJP8 1040 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CYP4Z1Q86W10 505 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 OSTM1Q86WC4 334 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 SLC22A15Q8IZD6 547 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 RHOXF1Q8NHV9 184 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 TEPSINQ96N21 525 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 FXYD1O00168 92 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 KPNA5O15131 536 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CREG1O75629 220 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 DCTP40126 519 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 SPRED1Q7Z699 444 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 VTCN1Q7Z7D3 282 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 HMCESQ96FZ2 354 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 FCRL5Q96RD9 977 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 CTRCQ99895 268 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 OPTCQ9UBM4 332 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 ZNF490Q9ULM2 529 aaPredicted RBP12.11□□□□□ -0.47
USP30-201ENST00000257548 B3GNT3Q9Y2A9 372 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 SLC9A8Q9Y2E8 581 aa12.11□□□□□ -0.47
USP30-201ENST00000257548 M0QX08 132 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 RGS14O43566 566 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 RPLP0P05388 317 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 BRCC3P46736 316 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 POLD2P49005 469 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 GP2P55259 537 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 GHRHRQ02643 423 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 GALNT2Q10471 571 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 QPRTQ15274 297 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 C16orf62Q7Z3J2 963 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 TIGD4Q8IY51 512 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 METTL4Q8N3J2 472 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 LRRC52Q8N7C0 313 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 TRPM4Q8TD43 1214 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 VPS35Q96QK1 796 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 EBPLQ9BY08 206 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 ITPAQ9BY32 194 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 AMBRA1Q9C0C7 1298 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 SPASTQ9UBP0 616 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 PCDHGC4Q9Y5F7 938 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 CLCA3PQ9Y6N3 262 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 BRWD3Q6RI45 1802 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 DLGAP1O14490 977 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 ITGB1P05556 798 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 STSP08842 583 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 CHRNB1P11230 501 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 PSKH1P11801 424 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 RGS4P49798 205 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 SEMG2Q02383 582 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 BCL7AQ4VC05 210 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 RFTN2Q52LD8 501 aaPredicted RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 RNASE12Q5GAN4 147 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 ZC3H12BQ5HYM0 836 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 DTX3Q8N9I9 347 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 OR6K2Q8NGY2 324 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 EEF1AKMT1Q8WVE0 214 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 MYDGFQ969H8 173 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 MAELQ96JY0 434 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 CLPBQ9H078 707 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 CCNB1IP1Q9NPC3 277 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 THG1LQ9NWX6 298 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 FAM240BA0A1B0GVZ2 78 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 SLC12A8A0AV02 714 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 NOS1APO75052 506 aaPredicted RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 CCNCP24863 283 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 CASP3P42574 277 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 CRATP43155 626 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 ELP6Q0PNE2 266 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms