RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 EEF2KO00418 725 aaKnown RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 FOXN1O15353 648 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ADRB1P08588 477 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 CD72P21854 359 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 TLE4Q04727 773 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 HABP2Q14520 560 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 OGFRL1Q5TC84 451 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC16A13Q7RTY0 426 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 VWA5B2Q8N398 1253 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 OR10H5Q8NGA6 315 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ITFG1Q8TB96 612 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ELP5Q8TE02 316 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 YIPF5Q969M3 257 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 RNF145Q96MT1 663 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 CSPG4P5Q96PW8 444 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SEPHS2Q99611 448 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 METTL9Q9H1A3 318 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 NAALAD2Q9Y3Q0 740 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 DBX1A6NMT0 343 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 USP17L10C9JJH3 530 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 LGI1O95970 557 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PFKMP08237 780 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 CTSHP09668 335 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 JAK3P52333 1124 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC12A3P55017 1021 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF280AP59817 542 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 USP41Q3LFD5 358 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 C9orf152Q5JTZ5 239 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 DARS2Q6PI48 645 aaKnown RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF605Q86T29 641 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 RFX6Q8HWS3 928 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 GPR65Q8IYL9 337 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PROM2Q8N271 834 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 EFCAB3Q8N7B9 438 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 TTC16Q8NEE8 873 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 RELTQ969Z4 430 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PGAP3Q96FM1 320 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 FAM20AQ96MK3 541 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SPATA5L1Q9BVQ7 753 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SEMA4CQ9C0C4 833 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ACTR6Q9GZN1 396 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 TMEM45AQ9NWC5 275 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF70Q9UC06 446 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 A0A1B0GTQ1 180 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 TCRBV5S4A2TA0A5A2 114 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 MEIOCA2RUB1 952 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 YY2O15391 372 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PRODHO43272 600 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ABHD2P08910 425 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 MAKP20794 623 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 RPL4P36578 427 aaKnown RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PREPP48147 710 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC1A6P48664 564 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 AFF3P51826 1226 aaKnown RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 GRIK2Q13002 908 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 MTMR2Q13614 643 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 GTF2H3Q13889 308 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 FAM122BQ7Z309 247 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PAQR7Q86WK9 346 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC34A3Q8N130 599 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ZFAND1Q8TCF1 268 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 RAB3CQ96E17 227 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 CCDC3Q9BQI4 270 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 TIMM29Q9BSF4 260 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 FRMD8P1Q9BZ68 369 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 POLR3FQ9H1D9 316 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF275Q9NSD4 429 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ZFR2Q9UPR6 939 aaKnown RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC22A14Q9Y267 594 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 MRASO14807 208 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 AVILO75366 819 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PSAPP07602 524 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ITGA4P13612 1032 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 KLRK1P26718 216 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PCSK6P29122 969 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC1A2P43004 574 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 GNPDA1P46926 289 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 CDC34P49427 236 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ARF3P61204 181 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ARF1P84077 181 aaKnown RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 PTPAQ15257 358 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 AANATQ16613 207 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 CERS6Q6ZMG9 384 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 ERMP1Q7Z2K6 904 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 TSPAN33Q86UF1 283 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 OR14K1Q8NGZ2 314 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC7A6OSQ96CW6 309 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 NKX6-2Q9C056 277 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 FN3KQ9H479 309 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 MAP10Q9P2G4 905 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 GPR34Q9UPC5 381 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 RGPD8O14715 1765 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 MYOCOSA0A1B0GUC4 107 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 C17orf113A0A1B0GUU1 675 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 VNN2O95498 520 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 CNOT4O95628 575 aaKnown RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 OR56A5P0C7T3 313 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC2A2P11168 524 aaPredicted RBP6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 RALAP11233 206 aa6.64□□□□□ -1.35
PDGFRA-201ENST00000257290 GRK4P32298 578 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms