RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 PLD3Q8IV08 490 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 CANT1Q8WVQ1 401 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 MYLIPQ8WY64 445 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 PEX13Q92968 403 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 C19orf60Q96EN9 201 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 C11orf24Q96F05 449 aaPredicted RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 SCLYQ96I15 445 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 FAM210AQ96ND0 272 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 MAGEL2Q9UJ55 1249 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 TIMM22Q9Y584 194 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 MAGED1Q9Y5V3 778 aaPredicted RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 TRBV5-4A0A0C4DH59 114 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TLR5O60602 858 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 COQ9O75208 318 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 KCNH1O95259 989 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 GPIP06744 558 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 HTR1AP08908 422 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 PTPRNQ16849 979 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 FUT11Q495W5 492 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 FUT10Q6P4F1 479 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 NCEH1Q6PIU2 408 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 HACD2Q6Y1H2 254 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 USP51Q70EK9 711 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 PTRH1Q86Y79 214 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 TMC8Q8IU68 726 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 APCDD1Q8J025 514 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 SFRP1Q8N474 314 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 SIDT2Q8NBJ9 832 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 ITFG1Q8TB96 612 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TFAP2CQ92754 450 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 RPF2Q9H7B2 306 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 ZNF696Q9H7X3 374 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 SNX6Q9UNH7 406 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 LSM1O15116 133 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 MATN4O95460 622 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 ANXA6P08133 673 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 HGFP14210 728 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 CD9P21926 228 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 S100A5P33763 92 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 ALDH3B2P48448 385 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 GBX1Q14549 363 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 IRAK1BP1Q5VVH5 260 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TMEM214Q6NUQ4 689 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 USP45Q70EL2 814 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 ARMCX6Q7L4S7 300 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 RBFAQ8N0V3 343 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TCAIMQ8N3R3 496 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TSPAN14Q8NG11 270 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TMEM74Q96NL1 305 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 HMX1Q9NP08 348 aaPredicted RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 PCDH12Q9NPG4 1184 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 AHSPQ9NZD4 102 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 IL17CQ9P0M4 197 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TPRKBQ9Y3C4 175 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 AP4B1Q9Y6B7 739 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 DHRS12A0PJE2 317 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TBKBP1A7MCY6 615 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 NDUFB5O43674 189 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 PKMP14618 531 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 S100A3P33764 101 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 CCT8P50990 548 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 UFM1P61960 85 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 SGO1Q5FBB7 561 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 PDPRQ8NCN5 879 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 OR4K2Q8NGD2 314 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 DNAJB8Q8NHS0 232 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 ELAC1Q9H777 363 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 ARMC1Q9NVT9 282 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 CNOT6Q9ULM6 557 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 ACVR2AP27037 513 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 RCVRNP35243 200 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 RPL3P39023 403 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 CCR2P41597 374 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 DEFA1P59665 94 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 DEFA3P59666 94 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 GNA12Q03113 381 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TRAF3Q13114 568 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 TMEM215Q68D42 235 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 ABRAXAS1Q6UWZ7 409 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 RRM2BQ7LG56 351 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 BBS7Q8IWZ6 715 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 APOL4Q9BPW4 351 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 DERL2Q9GZP9 239 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 SERHLQ9NQF3 203 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 SELENONQ9NZV5 590 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 MTRRQ9UBK8 725 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 CNOT11Q9UKZ1 510 aaKnown RBP9.01□□□□□ -0.97
RPA1-201ENST00000254719 DYRK1BQ9Y463 629 aa9.01□□□□□ -0.97
RPA1-201ENST00000254719 CCDC88CQ9P219 2028 aa9□□□□□ -0.97
RPA1-201ENST00000254719 NCF1BA6NI72 391 aaPredicted RBP9□□□□□ -0.97
RPA1-201ENST00000254719 NCF1CA8MVU1 366 aaPredicted RBP9□□□□□ -0.97
RPA1-201ENST00000254719 PDLIM1O00151 329 aa9□□□□□ -0.97
RPA1-201ENST00000254719 IMPDH2P12268 514 aa9□□□□□ -0.97
RPA1-201ENST00000254719 NCF1P14598 390 aaPredicted RBP9□□□□□ -0.97
RPA1-201ENST00000254719 CDH4P55283 916 aa9□□□□□ -0.97
RPA1-201ENST00000254719 SNRPD1P62314 119 aaKnown RBP9□□□□□ -0.97
RPA1-201ENST00000254719 RFTN2Q52LD8 501 aaPredicted RBP9□□□□□ -0.97
RPA1-201ENST00000254719 TSEN54Q7Z6J9 526 aaKnown RBP9□□□□□ -0.97
RPA1-201ENST00000254719 TMEM179BQ7Z7N9 219 aa9□□□□□ -0.97
RPA1-201ENST00000254719 TWIST2Q8WVJ9 160 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms